Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC35.8■■■■□ 3.32
CDC42BPAQ5VT25 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC35.79■■■■□ 3.32
CDC42BPAQ5VT25 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC35.79■■■■□ 3.32
CDC42BPAQ5VT25 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC35.79■■■■□ 3.32
CDC42BPAQ5VT25 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC35.79■■■■□ 3.32
CDC42BPAQ5VT25 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC35.78■■■■□ 3.32
CDC42BPAQ5VT25 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC35.78■■■■□ 3.32
CDC42BPAQ5VT25 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
CDC42BPAQ5VT25 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC35.78■■■■□ 3.32
CDC42BPAQ5VT25 AC004448.1-201ENST00000458332 883 ntBASIC35.77■■■■□ 3.32
CDC42BPAQ5VT25 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC35.77■■■■□ 3.32
CDC42BPAQ5VT25 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC35.77■■■■□ 3.32
CDC42BPAQ5VT25 AC131274.2-201ENST00000580697 1507 ntBASIC35.77■■■■□ 3.32
CDC42BPAQ5VT25 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
CDC42BPAQ5VT25 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC35.77■■■■□ 3.32
CDC42BPAQ5VT25 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC35.76■■■■□ 3.32
CDC42BPAQ5VT25 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC35.76■■■■□ 3.32
CDC42BPAQ5VT25 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC35.76■■■■□ 3.32
CDC42BPAQ5VT25 GATM-206ENST00000558336 1522 ntTSL 2 BASIC35.76■■■■□ 3.32
CDC42BPAQ5VT25 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC35.76■■■■□ 3.32
CDC42BPAQ5VT25 AP001330.3-201ENST00000520123 633 ntBASIC35.76■■■■□ 3.31
CDC42BPAQ5VT25 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC35.76■■■■□ 3.31
CDC42BPAQ5VT25 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
CDC42BPAQ5VT25 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC35.75■■■■□ 3.31
CDC42BPAQ5VT25 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
CDC42BPAQ5VT25 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC35.74■■■■□ 3.31
CDC42BPAQ5VT25 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
CDC42BPAQ5VT25 SF1-220ENST00000626028 704 ntTSL 2 BASIC35.74■■■■□ 3.31
CDC42BPAQ5VT25 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC35.74■■■■□ 3.31
CDC42BPAQ5VT25 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC35.74■■■■□ 3.31
CDC42BPAQ5VT25 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC35.74■■■■□ 3.31
CDC42BPAQ5VT25 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC35.74■■■■□ 3.31
CDC42BPAQ5VT25 EDA-201ENST00000338901 1233 ntBASIC35.74■■■■□ 3.31
CDC42BPAQ5VT25 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC35.74■■■■□ 3.31
CDC42BPAQ5VT25 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC35.74■■■■□ 3.31
CDC42BPAQ5VT25 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
CDC42BPAQ5VT25 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC35.73■■■■□ 3.31
CDC42BPAQ5VT25 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC35.73■■■■□ 3.31
CDC42BPAQ5VT25 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC35.73■■■■□ 3.31
CDC42BPAQ5VT25 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC35.72■■■■□ 3.31
CDC42BPAQ5VT25 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
CDC42BPAQ5VT25 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC35.72■■■■□ 3.31
CDC42BPAQ5VT25 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC35.71■■■■□ 3.31
CDC42BPAQ5VT25 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC35.71■■■■□ 3.31
CDC42BPAQ5VT25 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC35.71■■■■□ 3.31
CDC42BPAQ5VT25 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
CDC42BPAQ5VT25 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC35.71■■■■□ 3.31
CDC42BPAQ5VT25 AC105265.2-201ENST00000467189 838 ntBASIC35.71■■■■□ 3.31
CDC42BPAQ5VT25 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC35.7■■■■□ 3.31
CDC42BPAQ5VT25 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC35.7■■■■□ 3.31
CDC42BPAQ5VT25 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC35.7■■■■□ 3.31
CDC42BPAQ5VT25 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC35.7■■■■□ 3.31
CDC42BPAQ5VT25 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.3
CDC42BPAQ5VT25 MIR939-201ENST00000401314 82 ntBASIC35.69■■■■□ 3.3
CDC42BPAQ5VT25 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC35.69■■■■□ 3.3
CDC42BPAQ5VT25 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC35.69■■■■□ 3.3
CDC42BPAQ5VT25 PTMA-205ENST00000410064 814 ntTSL 2 BASIC35.69■■■■□ 3.3
CDC42BPAQ5VT25 AF213884.3-201ENST00000563833 479 ntBASIC35.69■■■■□ 3.3
CDC42BPAQ5VT25 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
CDC42BPAQ5VT25 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC35.68■■■■□ 3.3
CDC42BPAQ5VT25 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC35.68■■■■□ 3.3
CDC42BPAQ5VT25 SRD5A1P1-201ENST00000442297 786 ntBASIC35.68■■■■□ 3.3
CDC42BPAQ5VT25 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC35.68■■■■□ 3.3
CDC42BPAQ5VT25 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC35.67■■■■□ 3.3
CDC42BPAQ5VT25 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC35.67■■■■□ 3.3
CDC42BPAQ5VT25 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
CDC42BPAQ5VT25 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC35.67■■■■□ 3.3
CDC42BPAQ5VT25 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
CDC42BPAQ5VT25 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
CDC42BPAQ5VT25 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC35.66■■■■□ 3.3
CDC42BPAQ5VT25 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
CDC42BPAQ5VT25 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
CDC42BPAQ5VT25 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC35.65■■■■□ 3.3
CDC42BPAQ5VT25 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC35.64■■■■□ 3.3
CDC42BPAQ5VT25 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC35.64■■■■□ 3.3
CDC42BPAQ5VT25 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC35.64■■■■□ 3.3
CDC42BPAQ5VT25 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC35.63■■■■□ 3.29
CDC42BPAQ5VT25 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
CDC42BPAQ5VT25 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC35.63■■■■□ 3.29
CDC42BPAQ5VT25 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
CDC42BPAQ5VT25 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC35.63■■■■□ 3.29
CDC42BPAQ5VT25 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC35.62■■■■□ 3.29
CDC42BPAQ5VT25 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC35.62■■■■□ 3.29
CDC42BPAQ5VT25 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC35.62■■■■□ 3.29
CDC42BPAQ5VT25 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
CDC42BPAQ5VT25 GRAMD4P4-201ENST00000613563 1115 ntBASIC35.62■■■■□ 3.29
CDC42BPAQ5VT25 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
CDC42BPAQ5VT25 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC35.61■■■■□ 3.29
CDC42BPAQ5VT25 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC35.61■■■■□ 3.29
CDC42BPAQ5VT25 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC35.6■■■■□ 3.29
CDC42BPAQ5VT25 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC35.6■■■■□ 3.29
CDC42BPAQ5VT25 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
CDC42BPAQ5VT25 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC35.6■■■■□ 3.29
CDC42BPAQ5VT25 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC35.59■■■■□ 3.29
CDC42BPAQ5VT25 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
CDC42BPAQ5VT25 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
CDC42BPAQ5VT25 AC005703.6-201ENST00000623265 1329 ntBASIC35.59■■■■□ 3.29
CDC42BPAQ5VT25 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC35.59■■■■□ 3.29
CDC42BPAQ5VT25 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC35.59■■■■□ 3.29
CDC42BPAQ5VT25 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms