Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCNYL3P0C7X3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC22.3■■□□□ 1.16
CCNYL3P0C7X3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.3■■□□□ 1.16
CCNYL3P0C7X3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCNYL3P0C7X3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CCNYL3P0C7X3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCNYL3P0C7X3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCNYL3P0C7X3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCNYL3P0C7X3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCNYL3P0C7X3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
CCNYL3P0C7X3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CCNYL3P0C7X3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.29■■□□□ 1.16
CCNYL3P0C7X3 MTDHP2-201ENST00000601468 714 ntBASIC22.29■■□□□ 1.16
CCNYL3P0C7X3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CCNYL3P0C7X3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CCNYL3P0C7X3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNYL3P0C7X3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNYL3P0C7X3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNYL3P0C7X3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CCNYL3P0C7X3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNYL3P0C7X3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.28■■□□□ 1.16
CCNYL3P0C7X3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.28■■□□□ 1.16
CCNYL3P0C7X3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CCNYL3P0C7X3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.28■■□□□ 1.16
CCNYL3P0C7X3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNYL3P0C7X3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CCNYL3P0C7X3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCNYL3P0C7X3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCNYL3P0C7X3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC22.27■■□□□ 1.16
CCNYL3P0C7X3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.27■■□□□ 1.16
CCNYL3P0C7X3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCNYL3P0C7X3 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC22.27■■□□□ 1.16
CCNYL3P0C7X3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
CCNYL3P0C7X3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CCNYL3P0C7X3 FOXO3B-201ENST00000395675 1928 ntBASIC22.26■■□□□ 1.15
CCNYL3P0C7X3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCNYL3P0C7X3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC22.26■■□□□ 1.15
CCNYL3P0C7X3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.26■■□□□ 1.15
CCNYL3P0C7X3 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.26■■□□□ 1.15
CCNYL3P0C7X3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC22.26■■□□□ 1.15
CCNYL3P0C7X3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
CCNYL3P0C7X3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNYL3P0C7X3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.25■■□□□ 1.15
CCNYL3P0C7X3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.25■■□□□ 1.15
CCNYL3P0C7X3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNYL3P0C7X3 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCNYL3P0C7X3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CCNYL3P0C7X3 MIR6724-1-201ENST00000616420 92 ntBASIC22.24■■□□□ 1.15
CCNYL3P0C7X3 MIR6724-2-201ENST00000616483 92 ntBASIC22.24■■□□□ 1.15
CCNYL3P0C7X3 MIR6724-4-201ENST00000617390 92 ntBASIC22.24■■□□□ 1.15
CCNYL3P0C7X3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.24■■□□□ 1.15
CCNYL3P0C7X3 MIR6724-3-201ENST00000622482 92 ntBASIC22.24■■□□□ 1.15
CCNYL3P0C7X3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
CCNYL3P0C7X3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCNYL3P0C7X3 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCNYL3P0C7X3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.23■■□□□ 1.15
CCNYL3P0C7X3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.23■■□□□ 1.15
CCNYL3P0C7X3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCNYL3P0C7X3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.23■■□□□ 1.15
CCNYL3P0C7X3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCNYL3P0C7X3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
CCNYL3P0C7X3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
CCNYL3P0C7X3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCNYL3P0C7X3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCNYL3P0C7X3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCNYL3P0C7X3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCNYL3P0C7X3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.22■■□□□ 1.15
CCNYL3P0C7X3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.22■■□□□ 1.15
CCNYL3P0C7X3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.22■■□□□ 1.15
CCNYL3P0C7X3 AL356740.2-201ENST00000601559 647 ntBASIC22.22■■□□□ 1.15
CCNYL3P0C7X3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
CCNYL3P0C7X3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
CCNYL3P0C7X3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCNYL3P0C7X3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.21■■□□□ 1.15
CCNYL3P0C7X3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.21■■□□□ 1.15
CCNYL3P0C7X3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
CCNYL3P0C7X3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CCNYL3P0C7X3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.21■■□□□ 1.15
CCNYL3P0C7X3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.21■■□□□ 1.15
CCNYL3P0C7X3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCNYL3P0C7X3 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
CCNYL3P0C7X3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
CCNYL3P0C7X3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
CCNYL3P0C7X3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
CCNYL3P0C7X3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCNYL3P0C7X3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCNYL3P0C7X3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCNYL3P0C7X3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCNYL3P0C7X3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCNYL3P0C7X3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.2■■□□□ 1.14
CCNYL3P0C7X3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.2■■□□□ 1.14
CCNYL3P0C7X3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.2■■□□□ 1.14
CCNYL3P0C7X3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.2■■□□□ 1.14
CCNYL3P0C7X3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.2■■□□□ 1.14
CCNYL3P0C7X3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.2■■□□□ 1.14
CCNYL3P0C7X3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CCNYL3P0C7X3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.2■■□□□ 1.14
CCNYL3P0C7X3 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCNYL3P0C7X3 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCNYL3P0C7X3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms