Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-AP01891 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-AP01891 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-AP01891 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
HLA-AP01891 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.49■□□□□ 0.71
HLA-AP01891 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-AP01891 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-AP01891 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
HLA-AP01891 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-AP01891 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-AP01891 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-AP01891 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.48■□□□□ 0.71
HLA-AP01891 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
HLA-AP01891 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-AP01891 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
HLA-AP01891 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
HLA-AP01891 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-AP01891 LINC00565-201ENST00000562710 2331 ntBASIC19.48■□□□□ 0.71
HLA-AP01891 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-AP01891 AL359258.2-201ENST00000564063 1566 ntBASIC19.48■□□□□ 0.71
HLA-AP01891 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-AP01891 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
HLA-AP01891 EP400NL-214ENST00000641289 2402 ntBASIC19.47■□□□□ 0.71
HLA-AP01891 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-AP01891 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.47■□□□□ 0.71
HLA-AP01891 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-AP01891 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.47■□□□□ 0.71
HLA-AP01891 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.47■□□□□ 0.71
HLA-AP01891 CR559946.2-201ENST00000623684 991 ntBASIC19.47■□□□□ 0.71
HLA-AP01891 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-AP01891 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-AP01891 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-AP01891 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.47■□□□□ 0.71
HLA-AP01891 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-AP01891 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.47■□□□□ 0.71
HLA-AP01891 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-AP01891 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-AP01891 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
HLA-AP01891 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
HLA-AP01891 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.46■□□□□ 0.71
HLA-AP01891 MIR6089-201ENST00000616698 64 ntBASIC19.46■□□□□ 0.71
HLA-AP01891 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
HLA-AP01891 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.46■□□□□ 0.71
HLA-AP01891 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-AP01891 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-AP01891 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-AP01891 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.45■□□□□ 0.7
HLA-AP01891 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-AP01891 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-AP01891 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.45■□□□□ 0.7
HLA-AP01891 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-AP01891 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-AP01891 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-AP01891 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HLA-AP01891 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-AP01891 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
HLA-AP01891 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-AP01891 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.44■□□□□ 0.7
HLA-AP01891 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-AP01891 MIR3648-2-201ENST00000581792 180 ntBASIC19.44■□□□□ 0.7
HLA-AP01891 AC016575.1-201ENST00000607026 382 ntBASIC19.44■□□□□ 0.7
HLA-AP01891 MIR3648-1-201ENST00000615959 180 ntBASIC19.44■□□□□ 0.7
HLA-AP01891 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.44■□□□□ 0.7
HLA-AP01891 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-AP01891 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
HLA-AP01891 MIR219A2-201ENST00000608502 1504 ntBASIC19.44■□□□□ 0.7
HLA-AP01891 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
HLA-AP01891 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-AP01891 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-AP01891 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-AP01891 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-AP01891 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HLA-AP01891 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-AP01891 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HLA-AP01891 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.43■□□□□ 0.7
HLA-AP01891 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-AP01891 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HLA-AP01891 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.43■□□□□ 0.7
HLA-AP01891 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-AP01891 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-AP01891 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-AP01891 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-AP01891 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
HLA-AP01891 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-AP01891 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-AP01891 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-AP01891 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-AP01891 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-AP01891 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-AP01891 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-AP01891 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
HLA-AP01891 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-AP01891 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.42■□□□□ 0.7
HLA-AP01891 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-AP01891 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-AP01891 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-AP01891 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HLA-AP01891 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-AP01891 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HLA-AP01891 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms