Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNOT4O95628 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
CNOT4O95628 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNOT4O95628 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNOT4O95628 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.55■□□□□ 0.88
CNOT4O95628 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.55■□□□□ 0.88
CNOT4O95628 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.55■□□□□ 0.88
CNOT4O95628 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.55■□□□□ 0.88
CNOT4O95628 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.55■□□□□ 0.88
CNOT4O95628 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.55■□□□□ 0.88
CNOT4O95628 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNOT4O95628 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
CNOT4O95628 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNOT4O95628 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CNOT4O95628 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.54■□□□□ 0.88
CNOT4O95628 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.54■□□□□ 0.88
CNOT4O95628 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CNOT4O95628 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNOT4O95628 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNOT4O95628 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CNOT4O95628 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CNOT4O95628 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.53■□□□□ 0.88
CNOT4O95628 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNOT4O95628 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNOT4O95628 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.53■□□□□ 0.88
CNOT4O95628 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNOT4O95628 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CNOT4O95628 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CNOT4O95628 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CNOT4O95628 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.53■□□□□ 0.88
CNOT4O95628 AF131216.4-201ENST00000638924 1588 ntBASIC20.52■□□□□ 0.88
CNOT4O95628 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNOT4O95628 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CNOT4O95628 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CNOT4O95628 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CNOT4O95628 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.51■□□□□ 0.87
CNOT4O95628 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CNOT4O95628 AC008406.3-201ENST00000620001 1374 ntBASIC20.51■□□□□ 0.87
CNOT4O95628 AC092028.1-203ENST00000608262 953 ntBASIC20.51■□□□□ 0.87
CNOT4O95628 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNOT4O95628 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.51■□□□□ 0.87
CNOT4O95628 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CNOT4O95628 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.5■□□□□ 0.87
CNOT4O95628 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNOT4O95628 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNOT4O95628 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNOT4O95628 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.5■□□□□ 0.87
CNOT4O95628 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.5■□□□□ 0.87
CNOT4O95628 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.5■□□□□ 0.87
CNOT4O95628 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.5■□□□□ 0.87
CNOT4O95628 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.5■□□□□ 0.87
CNOT4O95628 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNOT4O95628 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CNOT4O95628 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CNOT4O95628 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.49■□□□□ 0.87
CNOT4O95628 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNOT4O95628 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNOT4O95628 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CNOT4O95628 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CNOT4O95628 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.49■□□□□ 0.87
CNOT4O95628 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.49■□□□□ 0.87
CNOT4O95628 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
CNOT4O95628 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNOT4O95628 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
CNOT4O95628 MIR935-201ENST00000401179 91 ntBASIC20.48■□□□□ 0.87
CNOT4O95628 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.48■□□□□ 0.87
CNOT4O95628 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CNOT4O95628 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.48■□□□□ 0.87
CNOT4O95628 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.48■□□□□ 0.87
CNOT4O95628 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNOT4O95628 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.48■□□□□ 0.87
CNOT4O95628 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CNOT4O95628 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.48■□□□□ 0.87
CNOT4O95628 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CNOT4O95628 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNOT4O95628 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CNOT4O95628 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CNOT4O95628 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.47■□□□□ 0.87
CNOT4O95628 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.46■□□□□ 0.87
CNOT4O95628 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CNOT4O95628 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.46■□□□□ 0.87
CNOT4O95628 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNOT4O95628 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CNOT4O95628 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNOT4O95628 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNOT4O95628 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.46■□□□□ 0.87
CNOT4O95628 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CNOT4O95628 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CNOT4O95628 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CNOT4O95628 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CNOT4O95628 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.45■□□□□ 0.86
CNOT4O95628 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.45■□□□□ 0.86
CNOT4O95628 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.45■□□□□ 0.86
CNOT4O95628 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.45■□□□□ 0.86
CNOT4O95628 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNOT4O95628 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.45■□□□□ 0.86
CNOT4O95628 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CNOT4O95628 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.44■□□□□ 0.86
CNOT4O95628 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CNOT4O95628 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms