Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC092028.1-203ENST00000608262 953 ntBASIC21.03■□□□□ 0.96
ZIC3O60481 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZIC3O60481 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
ZIC3O60481 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZIC3O60481 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZIC3O60481 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZIC3O60481 AC138932.3-201ENST00000567634 1902 ntBASIC21.02■□□□□ 0.96
ZIC3O60481 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.02■□□□□ 0.96
ZIC3O60481 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.02■□□□□ 0.96
ZIC3O60481 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZIC3O60481 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
ZIC3O60481 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.01■□□□□ 0.95
ZIC3O60481 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZIC3O60481 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZIC3O60481 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZIC3O60481 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZIC3O60481 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZIC3O60481 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZIC3O60481 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.01■□□□□ 0.95
ZIC3O60481 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZIC3O60481 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZIC3O60481 AP003733.4-201ENST00000623785 1697 ntBASIC21.01■□□□□ 0.95
ZIC3O60481 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZIC3O60481 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZIC3O60481 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZIC3O60481 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
ZIC3O60481 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21■□□□□ 0.95
ZIC3O60481 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21■□□□□ 0.95
ZIC3O60481 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZIC3O60481 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
ZIC3O60481 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZIC3O60481 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZIC3O60481 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZIC3O60481 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
ZIC3O60481 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.99■□□□□ 0.95
ZIC3O60481 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZIC3O60481 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZIC3O60481 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.99■□□□□ 0.95
ZIC3O60481 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZIC3O60481 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
ZIC3O60481 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZIC3O60481 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZIC3O60481 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZIC3O60481 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
ZIC3O60481 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.98■□□□□ 0.95
ZIC3O60481 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZIC3O60481 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZIC3O60481 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZIC3O60481 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.97■□□□□ 0.95
ZIC3O60481 HLA-L-211ENST00000482052 1765 ntBASIC20.97■□□□□ 0.95
ZIC3O60481 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.97■□□□□ 0.95
ZIC3O60481 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.97■□□□□ 0.95
ZIC3O60481 UNC93B8-201ENST00000511903 705 ntBASIC20.97■□□□□ 0.95
ZIC3O60481 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
ZIC3O60481 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.97■□□□□ 0.95
ZIC3O60481 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.96■□□□□ 0.95
ZIC3O60481 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZIC3O60481 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.96■□□□□ 0.95
ZIC3O60481 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.96■□□□□ 0.95
ZIC3O60481 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZIC3O60481 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.96■□□□□ 0.95
ZIC3O60481 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZIC3O60481 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.96■□□□□ 0.95
ZIC3O60481 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZIC3O60481 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZIC3O60481 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
ZIC3O60481 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
ZIC3O60481 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZIC3O60481 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZIC3O60481 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZIC3O60481 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.95■□□□□ 0.94
ZIC3O60481 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.95■□□□□ 0.94
ZIC3O60481 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZIC3O60481 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZIC3O60481 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
ZIC3O60481 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZIC3O60481 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
ZIC3O60481 TSPY9P-201ENST00000440215 945 ntBASIC20.94■□□□□ 0.94
ZIC3O60481 TSPY11P-201ENST00000442607 1045 ntBASIC20.94■□□□□ 0.94
ZIC3O60481 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.94■□□□□ 0.94
ZIC3O60481 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.94■□□□□ 0.94
ZIC3O60481 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.94■□□□□ 0.94
ZIC3O60481 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.94■□□□□ 0.94
ZIC3O60481 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.94■□□□□ 0.94
ZIC3O60481 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZIC3O60481 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZIC3O60481 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZIC3O60481 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
ZIC3O60481 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.93■□□□□ 0.94
ZIC3O60481 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.93■□□□□ 0.94
ZIC3O60481 SNX5-217ENST00000606557 1087 ntBASIC20.93■□□□□ 0.94
ZIC3O60481 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZIC3O60481 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
ZIC3O60481 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZIC3O60481 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZIC3O60481 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZIC3O60481 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.93■□□□□ 0.94
ZIC3O60481 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZIC3O60481 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ZIC3O60481 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms