Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NDUFA1O15239 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
NDUFA1O15239 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC15.82■□□□□ 0.12
NDUFA1O15239 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFA1O15239 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFA1O15239 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFA1O15239 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
NDUFA1O15239 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFA1O15239 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NDUFA1O15239 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFA1O15239 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
NDUFA1O15239 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFA1O15239 SHD-204ENST00000599689 1729 ntTSL 5 BASIC15.82■□□□□ 0.12
NDUFA1O15239 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFA1O15239 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFA1O15239 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NDUFA1O15239 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFA1O15239 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFA1O15239 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFA1O15239 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFA1O15239 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC15.81■□□□□ 0.12
NDUFA1O15239 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NDUFA1O15239 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC15.81■□□□□ 0.12
NDUFA1O15239 METRNL-202ENST00000570778 967 ntTSL 5 BASIC15.81■□□□□ 0.12
NDUFA1O15239 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC15.81■□□□□ 0.12
NDUFA1O15239 C9orf163-202ENST00000624034 2573 ntBASIC15.81■□□□□ 0.12
NDUFA1O15239 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NDUFA1O15239 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFA1O15239 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC15.8■□□□□ 0.12
NDUFA1O15239 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC15.8■□□□□ 0.12
NDUFA1O15239 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
NDUFA1O15239 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFA1O15239 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFA1O15239 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFA1O15239 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC15.8■□□□□ 0.12
NDUFA1O15239 AC016575.1-201ENST00000607026 382 ntBASIC15.8■□□□□ 0.12
NDUFA1O15239 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFA1O15239 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFA1O15239 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFA1O15239 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFA1O15239 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NDUFA1O15239 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC15.8■□□□□ 0.12
NDUFA1O15239 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDUFA1O15239 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
NDUFA1O15239 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NDUFA1O15239 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDUFA1O15239 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NDUFA1O15239 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NDUFA1O15239 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC15.79■□□□□ 0.12
NDUFA1O15239 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
NDUFA1O15239 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDUFA1O15239 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
NDUFA1O15239 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NDUFA1O15239 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDUFA1O15239 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDUFA1O15239 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
NDUFA1O15239 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDUFA1O15239 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDUFA1O15239 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NDUFA1O15239 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC15.78■□□□□ 0.12
NDUFA1O15239 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDUFA1O15239 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NDUFA1O15239 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NDUFA1O15239 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NDUFA1O15239 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDUFA1O15239 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NDUFA1O15239 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC15.78■□□□□ 0.12
NDUFA1O15239 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NDUFA1O15239 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NDUFA1O15239 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NDUFA1O15239 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC15.78■□□□□ 0.12
NDUFA1O15239 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NDUFA1O15239 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NDUFA1O15239 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
NDUFA1O15239 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NDUFA1O15239 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NDUFA1O15239 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NDUFA1O15239 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC15.77■□□□□ 0.12
NDUFA1O15239 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC15.77■□□□□ 0.12
NDUFA1O15239 MIR6089-201ENST00000616698 64 ntBASIC15.77■□□□□ 0.12
NDUFA1O15239 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NDUFA1O15239 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
NDUFA1O15239 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NDUFA1O15239 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
NDUFA1O15239 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NDUFA1O15239 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NDUFA1O15239 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC15.76■□□□□ 0.11
NDUFA1O15239 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
NDUFA1O15239 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC15.76■□□□□ 0.11
NDUFA1O15239 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
NDUFA1O15239 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NDUFA1O15239 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NDUFA1O15239 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC15.75■□□□□ 0.11
NDUFA1O15239 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
NDUFA1O15239 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NDUFA1O15239 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NDUFA1O15239 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC15.75■□□□□ 0.11
NDUFA1O15239 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NDUFA1O15239 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC15.74■□□□□ 0.11
NDUFA1O15239 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms