Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.13■□□□□ 0.97
NPIPA2E9PIF3 AC010997.5-201ENST00000609182 354 ntBASIC21.13■□□□□ 0.97
NPIPA2E9PIF3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPIPA2E9PIF3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.12■□□□□ 0.97
NPIPA2E9PIF3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
NPIPA2E9PIF3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.12■□□□□ 0.97
NPIPA2E9PIF3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NPIPA2E9PIF3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
NPIPA2E9PIF3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
NPIPA2E9PIF3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.12■□□□□ 0.97
NPIPA2E9PIF3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.12■□□□□ 0.97
NPIPA2E9PIF3 MTDHP2-201ENST00000601468 714 ntBASIC21.12■□□□□ 0.97
NPIPA2E9PIF3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NPIPA2E9PIF3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.12■□□□□ 0.97
NPIPA2E9PIF3 AC020928.2-201ENST00000588717 2197 ntBASIC21.12■□□□□ 0.97
NPIPA2E9PIF3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPIPA2E9PIF3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.11■□□□□ 0.97
NPIPA2E9PIF3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPIPA2E9PIF3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.11■□□□□ 0.97
NPIPA2E9PIF3 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPIPA2E9PIF3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.11■□□□□ 0.97
NPIPA2E9PIF3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPIPA2E9PIF3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPIPA2E9PIF3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
NPIPA2E9PIF3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NPIPA2E9PIF3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.1■□□□□ 0.97
NPIPA2E9PIF3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
NPIPA2E9PIF3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
NPIPA2E9PIF3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.1■□□□□ 0.97
NPIPA2E9PIF3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NPIPA2E9PIF3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NPIPA2E9PIF3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NPIPA2E9PIF3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPIPA2E9PIF3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPIPA2E9PIF3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.09■□□□□ 0.97
NPIPA2E9PIF3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.09■□□□□ 0.97
NPIPA2E9PIF3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.09■□□□□ 0.97
NPIPA2E9PIF3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPIPA2E9PIF3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPIPA2E9PIF3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPIPA2E9PIF3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPIPA2E9PIF3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.08■□□□□ 0.97
NPIPA2E9PIF3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NPIPA2E9PIF3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.08■□□□□ 0.97
NPIPA2E9PIF3 AF131216.4-201ENST00000638924 1588 ntBASIC21.08■□□□□ 0.97
NPIPA2E9PIF3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
NPIPA2E9PIF3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
NPIPA2E9PIF3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
NPIPA2E9PIF3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
NPIPA2E9PIF3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
NPIPA2E9PIF3 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.07■□□□□ 0.96
NPIPA2E9PIF3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.07■□□□□ 0.96
NPIPA2E9PIF3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NPIPA2E9PIF3 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
NPIPA2E9PIF3 AC090877.2-201ENST00000558441 1738 ntBASIC21.07■□□□□ 0.96
NPIPA2E9PIF3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 AC019069.1-201ENST00000610008 1333 ntBASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
NPIPA2E9PIF3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 SLC6A10P-202ENST00000431994 2058 ntBASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 MIR6724-1-201ENST00000616420 92 ntBASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 MIR6724-2-201ENST00000616483 92 ntBASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 MIR6724-4-201ENST00000617390 92 ntBASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 MIR6724-3-201ENST00000622482 92 ntBASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.05■□□□□ 0.96
NPIPA2E9PIF3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPA2E9PIF3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
NPIPA2E9PIF3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPA2E9PIF3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
NPIPA2E9PIF3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.04■□□□□ 0.96
NPIPA2E9PIF3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPA2E9PIF3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.04■□□□□ 0.96
NPIPA2E9PIF3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.04■□□□□ 0.96
NPIPA2E9PIF3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPA2E9PIF3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NPIPA2E9PIF3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.04■□□□□ 0.96
NPIPA2E9PIF3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms