Protein–RNA interactions for Protein: A0A0U1RRK4

LOC107984640, Uncharacterized protein, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC107984640A0A0U1RRK4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LOC107984640A0A0U1RRK4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LOC107984640A0A0U1RRK4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC15.3■□□□□ 0.04
LOC107984640A0A0U1RRK4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LOC107984640A0A0U1RRK4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
LOC107984640A0A0U1RRK4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LOC107984640A0A0U1RRK4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LOC107984640A0A0U1RRK4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LOC107984640A0A0U1RRK4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LOC107984640A0A0U1RRK4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LOC107984640A0A0U1RRK4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LOC107984640A0A0U1RRK4 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC15.29■□□□□ 0.04
LOC107984640A0A0U1RRK4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LOC107984640A0A0U1RRK4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LOC107984640A0A0U1RRK4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
LOC107984640A0A0U1RRK4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LOC107984640A0A0U1RRK4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC15.29■□□□□ 0.04
LOC107984640A0A0U1RRK4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC15.29■□□□□ 0.04
LOC107984640A0A0U1RRK4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LOC107984640A0A0U1RRK4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LOC107984640A0A0U1RRK4 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LOC107984640A0A0U1RRK4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LOC107984640A0A0U1RRK4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LOC107984640A0A0U1RRK4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.28■□□□□ 0.04
LOC107984640A0A0U1RRK4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC15.28■□□□□ 0.04
LOC107984640A0A0U1RRK4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LOC107984640A0A0U1RRK4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LOC107984640A0A0U1RRK4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LOC107984640A0A0U1RRK4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LOC107984640A0A0U1RRK4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC15.28■□□□□ 0.04
LOC107984640A0A0U1RRK4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC15.28■□□□□ 0.04
LOC107984640A0A0U1RRK4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LOC107984640A0A0U1RRK4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LOC107984640A0A0U1RRK4 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LOC107984640A0A0U1RRK4 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LOC107984640A0A0U1RRK4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LOC107984640A0A0U1RRK4 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LOC107984640A0A0U1RRK4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LOC107984640A0A0U1RRK4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC15.28■□□□□ 0.04
LOC107984640A0A0U1RRK4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LOC107984640A0A0U1RRK4 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LOC107984640A0A0U1RRK4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC15.27■□□□□ 0.04
LOC107984640A0A0U1RRK4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LOC107984640A0A0U1RRK4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LOC107984640A0A0U1RRK4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC15.27■□□□□ 0.04
LOC107984640A0A0U1RRK4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
LOC107984640A0A0U1RRK4 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LOC107984640A0A0U1RRK4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
LOC107984640A0A0U1RRK4 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC15.27■□□□□ 0.04
LOC107984640A0A0U1RRK4 ABHD17AP5-201ENST00000580133 923 ntBASIC15.27■□□□□ 0.04
LOC107984640A0A0U1RRK4 MIR6765-201ENST00000614092 87 ntBASIC15.27■□□□□ 0.04
LOC107984640A0A0U1RRK4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LOC107984640A0A0U1RRK4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LOC107984640A0A0U1RRK4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
LOC107984640A0A0U1RRK4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC15.27■□□□□ 0.03
LOC107984640A0A0U1RRK4 C9orf163-202ENST00000624034 2573 ntBASIC15.27■□□□□ 0.03
LOC107984640A0A0U1RRK4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC15.27■□□□□ 0.03
LOC107984640A0A0U1RRK4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LOC107984640A0A0U1RRK4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LOC107984640A0A0U1RRK4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LOC107984640A0A0U1RRK4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LOC107984640A0A0U1RRK4 AP003733.4-201ENST00000623785 1697 ntBASIC15.26■□□□□ 0.03
LOC107984640A0A0U1RRK4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC15.26■□□□□ 0.03
LOC107984640A0A0U1RRK4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC15.26■□□□□ 0.03
LOC107984640A0A0U1RRK4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LOC107984640A0A0U1RRK4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LOC107984640A0A0U1RRK4 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LOC107984640A0A0U1RRK4 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LOC107984640A0A0U1RRK4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LOC107984640A0A0U1RRK4 SLC6A10P-202ENST00000431994 2058 ntBASIC15.26■□□□□ 0.03
LOC107984640A0A0U1RRK4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LOC107984640A0A0U1RRK4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LOC107984640A0A0U1RRK4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LOC107984640A0A0U1RRK4 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LOC107984640A0A0U1RRK4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LOC107984640A0A0U1RRK4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC15.25■□□□□ 0.03
LOC107984640A0A0U1RRK4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LOC107984640A0A0U1RRK4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LOC107984640A0A0U1RRK4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LOC107984640A0A0U1RRK4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LOC107984640A0A0U1RRK4 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LOC107984640A0A0U1RRK4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LOC107984640A0A0U1RRK4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LOC107984640A0A0U1RRK4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LOC107984640A0A0U1RRK4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LOC107984640A0A0U1RRK4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC15.24■□□□□ 0.03
LOC107984640A0A0U1RRK4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LOC107984640A0A0U1RRK4 RPS2P7-201ENST00000447334 885 ntBASIC15.24■□□□□ 0.03
LOC107984640A0A0U1RRK4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC15.24■□□□□ 0.03
LOC107984640A0A0U1RRK4 U85056.1-201ENST00000616429 682 ntBASIC15.24■□□□□ 0.03
LOC107984640A0A0U1RRK4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LOC107984640A0A0U1RRK4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LOC107984640A0A0U1RRK4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LOC107984640A0A0U1RRK4 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LOC107984640A0A0U1RRK4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LOC107984640A0A0U1RRK4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LOC107984640A0A0U1RRK4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC15.24■□□□□ 0.03
LOC107984640A0A0U1RRK4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LOC107984640A0A0U1RRK4 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LOC107984640A0A0U1RRK4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms