Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.45■□□□□ 0.7
TRBV6-7A0A0A0MS04 AC007029.1-201ENST00000604183 313 ntBASIC19.45■□□□□ 0.7
TRBV6-7A0A0A0MS04 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV6-7A0A0A0MS04 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV6-7A0A0A0MS04 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.45■□□□□ 0.7
TRBV6-7A0A0A0MS04 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.45■□□□□ 0.7
TRBV6-7A0A0A0MS04 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TRBV6-7A0A0A0MS04 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRBV6-7A0A0A0MS04 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRBV6-7A0A0A0MS04 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TRBV6-7A0A0A0MS04 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.44■□□□□ 0.7
TRBV6-7A0A0A0MS04 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV6-7A0A0A0MS04 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.44■□□□□ 0.7
TRBV6-7A0A0A0MS04 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.44■□□□□ 0.7
TRBV6-7A0A0A0MS04 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRBV6-7A0A0A0MS04 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV6-7A0A0A0MS04 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV6-7A0A0A0MS04 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV6-7A0A0A0MS04 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TRBV6-7A0A0A0MS04 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV6-7A0A0A0MS04 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV6-7A0A0A0MS04 KRT18P10-201ENST00000388836 1287 ntBASIC19.43■□□□□ 0.7
TRBV6-7A0A0A0MS04 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.43■□□□□ 0.7
TRBV6-7A0A0A0MS04 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.43■□□□□ 0.7
TRBV6-7A0A0A0MS04 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TRBV6-7A0A0A0MS04 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRBV6-7A0A0A0MS04 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRBV6-7A0A0A0MS04 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV6-7A0A0A0MS04 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV6-7A0A0A0MS04 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV6-7A0A0A0MS04 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TRBV6-7A0A0A0MS04 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV6-7A0A0A0MS04 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV6-7A0A0A0MS04 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
TRBV6-7A0A0A0MS04 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV6-7A0A0A0MS04 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRBV6-7A0A0A0MS04 AC004812.2-201ENST00000611079 2094 ntBASIC19.42■□□□□ 0.7
TRBV6-7A0A0A0MS04 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
TRBV6-7A0A0A0MS04 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRBV6-7A0A0A0MS04 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TRBV6-7A0A0A0MS04 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.41■□□□□ 0.7
TRBV6-7A0A0A0MS04 RAP2CP1-202ENST00000605179 643 ntBASIC19.41■□□□□ 0.7
TRBV6-7A0A0A0MS04 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV6-7A0A0A0MS04 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
TRBV6-7A0A0A0MS04 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV6-7A0A0A0MS04 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV6-7A0A0A0MS04 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRBV6-7A0A0A0MS04 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.4■□□□□ 0.7
TRBV6-7A0A0A0MS04 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV6-7A0A0A0MS04 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.4■□□□□ 0.7
TRBV6-7A0A0A0MS04 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.4■□□□□ 0.7
TRBV6-7A0A0A0MS04 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.4■□□□□ 0.7
TRBV6-7A0A0A0MS04 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRBV6-7A0A0A0MS04 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRBV6-7A0A0A0MS04 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.39■□□□□ 0.69
TRBV6-7A0A0A0MS04 C9orf163-202ENST00000624034 2573 ntBASIC19.39■□□□□ 0.69
TRBV6-7A0A0A0MS04 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV6-7A0A0A0MS04 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV6-7A0A0A0MS04 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV6-7A0A0A0MS04 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.38■□□□□ 0.69
TRBV6-7A0A0A0MS04 FOXO3B-201ENST00000395675 1928 ntBASIC19.38■□□□□ 0.69
TRBV6-7A0A0A0MS04 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.38■□□□□ 0.69
TRBV6-7A0A0A0MS04 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRBV6-7A0A0A0MS04 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV6-7A0A0A0MS04 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV6-7A0A0A0MS04 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV6-7A0A0A0MS04 HLA-L-211ENST00000482052 1765 ntBASIC19.37■□□□□ 0.69
TRBV6-7A0A0A0MS04 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV6-7A0A0A0MS04 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV6-7A0A0A0MS04 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TRBV6-7A0A0A0MS04 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TRBV6-7A0A0A0MS04 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
TRBV6-7A0A0A0MS04 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV6-7A0A0A0MS04 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV6-7A0A0A0MS04 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV6-7A0A0A0MS04 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV6-7A0A0A0MS04 AC026202.3-201ENST00000600805 1127 ntBASIC19.36■□□□□ 0.69
TRBV6-7A0A0A0MS04 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TRBV6-7A0A0A0MS04 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV6-7A0A0A0MS04 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TRBV6-7A0A0A0MS04 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
TRBV6-7A0A0A0MS04 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV6-7A0A0A0MS04 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TRBV6-7A0A0A0MS04 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV6-7A0A0A0MS04 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV6-7A0A0A0MS04 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.35■□□□□ 0.69
TRBV6-7A0A0A0MS04 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.35■□□□□ 0.69
TRBV6-7A0A0A0MS04 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC19.35■□□□□ 0.69
TRBV6-7A0A0A0MS04 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV6-7A0A0A0MS04 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV6-7A0A0A0MS04 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV6-7A0A0A0MS04 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV6-7A0A0A0MS04 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRBV6-7A0A0A0MS04 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV6-7A0A0A0MS04 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV6-7A0A0A0MS04 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV6-7A0A0A0MS04 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.34■□□□□ 0.69
TRBV6-7A0A0A0MS04 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV6-7A0A0A0MS04 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.34■□□□□ 0.69
TRBV6-7A0A0A0MS04 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms