Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
BLOC1S4Q9NUP1 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
BLOC1S4Q9NUP1 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.13■■□□□ 1.77
BLOC1S4Q9NUP1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
BLOC1S4Q9NUP1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
BLOC1S4Q9NUP1 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
BLOC1S4Q9NUP1 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
BLOC1S4Q9NUP1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
BLOC1S4Q9NUP1 AC093323.1-202ENST00000635031 2045 ntBASIC26.12■■□□□ 1.77
BLOC1S4Q9NUP1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.11■■□□□ 1.77
BLOC1S4Q9NUP1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
BLOC1S4Q9NUP1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
BLOC1S4Q9NUP1 HLA-L-211ENST00000482052 1765 ntBASIC26.11■■□□□ 1.77
BLOC1S4Q9NUP1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.11■■□□□ 1.77
BLOC1S4Q9NUP1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.11■■□□□ 1.77
BLOC1S4Q9NUP1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
BLOC1S4Q9NUP1 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
BLOC1S4Q9NUP1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
BLOC1S4Q9NUP1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
BLOC1S4Q9NUP1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.1■■□□□ 1.77
BLOC1S4Q9NUP1 LINC01124-201ENST00000409786 2117 ntBASIC26.1■■□□□ 1.77
BLOC1S4Q9NUP1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.1■■□□□ 1.77
BLOC1S4Q9NUP1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
BLOC1S4Q9NUP1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
BLOC1S4Q9NUP1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.09■■□□□ 1.77
BLOC1S4Q9NUP1 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
BLOC1S4Q9NUP1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
BLOC1S4Q9NUP1 AC103834.1-201ENST00000520383 144 ntBASIC26.09■■□□□ 1.77
BLOC1S4Q9NUP1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
BLOC1S4Q9NUP1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
BLOC1S4Q9NUP1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
BLOC1S4Q9NUP1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
BLOC1S4Q9NUP1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.08■■□□□ 1.77
BLOC1S4Q9NUP1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.08■■□□□ 1.77
BLOC1S4Q9NUP1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.08■■□□□ 1.77
BLOC1S4Q9NUP1 AC022616.5-201ENST00000518796 181 ntBASIC26.08■■□□□ 1.77
BLOC1S4Q9NUP1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
BLOC1S4Q9NUP1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
BLOC1S4Q9NUP1 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
BLOC1S4Q9NUP1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
BLOC1S4Q9NUP1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
BLOC1S4Q9NUP1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
BLOC1S4Q9NUP1 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.07■■□□□ 1.76
BLOC1S4Q9NUP1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.07■■□□□ 1.76
BLOC1S4Q9NUP1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
BLOC1S4Q9NUP1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
BLOC1S4Q9NUP1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
BLOC1S4Q9NUP1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.06■■□□□ 1.76
BLOC1S4Q9NUP1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.06■■□□□ 1.76
BLOC1S4Q9NUP1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
BLOC1S4Q9NUP1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
BLOC1S4Q9NUP1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
BLOC1S4Q9NUP1 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
BLOC1S4Q9NUP1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.05■■□□□ 1.76
BLOC1S4Q9NUP1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
BLOC1S4Q9NUP1 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.05■■□□□ 1.76
BLOC1S4Q9NUP1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
BLOC1S4Q9NUP1 MIR4508-201ENST00000584178 70 ntBASIC26.05■■□□□ 1.76
BLOC1S4Q9NUP1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.05■■□□□ 1.76
BLOC1S4Q9NUP1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
BLOC1S4Q9NUP1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
BLOC1S4Q9NUP1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC26.04■■□□□ 1.76
BLOC1S4Q9NUP1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
BLOC1S4Q9NUP1 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.04■■□□□ 1.76
BLOC1S4Q9NUP1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.04■■□□□ 1.76
BLOC1S4Q9NUP1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC26.04■■□□□ 1.76
BLOC1S4Q9NUP1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.04■■□□□ 1.76
BLOC1S4Q9NUP1 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
BLOC1S4Q9NUP1 LINC00543-201ENST00000567234 1845 ntBASIC26.03■■□□□ 1.76
BLOC1S4Q9NUP1 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
BLOC1S4Q9NUP1 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
BLOC1S4Q9NUP1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.02■■□□□ 1.76
BLOC1S4Q9NUP1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
BLOC1S4Q9NUP1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
BLOC1S4Q9NUP1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.02■■□□□ 1.76
BLOC1S4Q9NUP1 AC011551.1-201ENST00000614101 683 ntBASIC26.02■■□□□ 1.76
BLOC1S4Q9NUP1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
BLOC1S4Q9NUP1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.01■■□□□ 1.75
BLOC1S4Q9NUP1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC26.01■■□□□ 1.75
BLOC1S4Q9NUP1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
BLOC1S4Q9NUP1 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.01■■□□□ 1.75
BLOC1S4Q9NUP1 AC120024.1-201ENST00000562672 995 ntBASIC26.01■■□□□ 1.75
BLOC1S4Q9NUP1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26■■□□□ 1.75
BLOC1S4Q9NUP1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
BLOC1S4Q9NUP1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26■■□□□ 1.75
BLOC1S4Q9NUP1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
BLOC1S4Q9NUP1 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
BLOC1S4Q9NUP1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26■■□□□ 1.75
BLOC1S4Q9NUP1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
BLOC1S4Q9NUP1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26■■□□□ 1.75
BLOC1S4Q9NUP1 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
BLOC1S4Q9NUP1 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26■■□□□ 1.75
BLOC1S4Q9NUP1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26■■□□□ 1.75
BLOC1S4Q9NUP1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26■■□□□ 1.75
BLOC1S4Q9NUP1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
BLOC1S4Q9NUP1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
BLOC1S4Q9NUP1 KRT8P33-201ENST00000508125 1423 ntBASIC25.99■■□□□ 1.75
BLOC1S4Q9NUP1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
BLOC1S4Q9NUP1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.99■■□□□ 1.75
BLOC1S4Q9NUP1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.99■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms