Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CYSTM1Q9H1C7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CYSTM1Q9H1C7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CYSTM1Q9H1C7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC13.83□□□□□ -0.2
CYSTM1Q9H1C7 AL158211.5-201ENST00000623583 2518 ntBASIC13.83□□□□□ -0.2
CYSTM1Q9H1C7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CYSTM1Q9H1C7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CYSTM1Q9H1C7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC13.83□□□□□ -0.2
CYSTM1Q9H1C7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CYSTM1Q9H1C7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CYSTM1Q9H1C7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CYSTM1Q9H1C7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.83□□□□□ -0.2
CYSTM1Q9H1C7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CYSTM1Q9H1C7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
CYSTM1Q9H1C7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CYSTM1Q9H1C7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CYSTM1Q9H1C7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CYSTM1Q9H1C7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CYSTM1Q9H1C7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CYSTM1Q9H1C7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CYSTM1Q9H1C7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC13.82□□□□□ -0.2
CYSTM1Q9H1C7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC13.82□□□□□ -0.2
CYSTM1Q9H1C7 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CYSTM1Q9H1C7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC13.82□□□□□ -0.2
CYSTM1Q9H1C7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CYSTM1Q9H1C7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CYSTM1Q9H1C7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CYSTM1Q9H1C7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CYSTM1Q9H1C7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CYSTM1Q9H1C7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
CYSTM1Q9H1C7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
CYSTM1Q9H1C7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CYSTM1Q9H1C7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CYSTM1Q9H1C7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CYSTM1Q9H1C7 AC026471.1-201ENST00000564629 3026 ntBASIC13.82□□□□□ -0.2
CYSTM1Q9H1C7 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CYSTM1Q9H1C7 EED-207ENST00000528180 1745 ntTSL 5 BASIC13.81□□□□□ -0.2
CYSTM1Q9H1C7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CYSTM1Q9H1C7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC13.81□□□□□ -0.2
CYSTM1Q9H1C7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC13.81□□□□□ -0.2
CYSTM1Q9H1C7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CYSTM1Q9H1C7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC13.81□□□□□ -0.2
CYSTM1Q9H1C7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CYSTM1Q9H1C7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC13.81□□□□□ -0.2
CYSTM1Q9H1C7 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC13.81□□□□□ -0.2
CYSTM1Q9H1C7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CYSTM1Q9H1C7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CYSTM1Q9H1C7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
CYSTM1Q9H1C7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CYSTM1Q9H1C7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CYSTM1Q9H1C7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CYSTM1Q9H1C7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CYSTM1Q9H1C7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CYSTM1Q9H1C7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CYSTM1Q9H1C7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CYSTM1Q9H1C7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CYSTM1Q9H1C7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CYSTM1Q9H1C7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CYSTM1Q9H1C7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CYSTM1Q9H1C7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC13.8□□□□□ -0.2
CYSTM1Q9H1C7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CYSTM1Q9H1C7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC13.8□□□□□ -0.2
CYSTM1Q9H1C7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CYSTM1Q9H1C7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CYSTM1Q9H1C7 AL020996.1-203ENST00000536896 2307 ntBASIC13.8□□□□□ -0.2
CYSTM1Q9H1C7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC13.8□□□□□ -0.2
CYSTM1Q9H1C7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CYSTM1Q9H1C7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC13.79□□□□□ -0.2
CYSTM1Q9H1C7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CYSTM1Q9H1C7 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC13.79□□□□□ -0.2
CYSTM1Q9H1C7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC13.79□□□□□ -0.2
CYSTM1Q9H1C7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
CYSTM1Q9H1C7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC13.79□□□□□ -0.2
CYSTM1Q9H1C7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC13.78□□□□□ -0.2
CYSTM1Q9H1C7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CYSTM1Q9H1C7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CYSTM1Q9H1C7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CYSTM1Q9H1C7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CYSTM1Q9H1C7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CYSTM1Q9H1C7 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CYSTM1Q9H1C7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CYSTM1Q9H1C7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
CYSTM1Q9H1C7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC13.78□□□□□ -0.2
CYSTM1Q9H1C7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CYSTM1Q9H1C7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CYSTM1Q9H1C7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CYSTM1Q9H1C7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC13.78□□□□□ -0.2
CYSTM1Q9H1C7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CYSTM1Q9H1C7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
CYSTM1Q9H1C7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CYSTM1Q9H1C7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CYSTM1Q9H1C7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CYSTM1Q9H1C7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CYSTM1Q9H1C7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CYSTM1Q9H1C7 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CYSTM1Q9H1C7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
CYSTM1Q9H1C7 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CYSTM1Q9H1C7 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CYSTM1Q9H1C7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC13.76□□□□□ -0.21
CYSTM1Q9H1C7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms