Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
POLR2J3Q9H1A7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
POLR2J3Q9H1A7 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
POLR2J3Q9H1A7 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
POLR2J3Q9H1A7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
POLR2J3Q9H1A7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.49■■□□□ 1.03
POLR2J3Q9H1A7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR2J3Q9H1A7 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR2J3Q9H1A7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.49■■□□□ 1.03
POLR2J3Q9H1A7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR2J3Q9H1A7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR2J3Q9H1A7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR2J3Q9H1A7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
POLR2J3Q9H1A7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR2J3Q9H1A7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
POLR2J3Q9H1A7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
POLR2J3Q9H1A7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
POLR2J3Q9H1A7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.48■■□□□ 1.03
POLR2J3Q9H1A7 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
POLR2J3Q9H1A7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
POLR2J3Q9H1A7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.47■■□□□ 1.03
POLR2J3Q9H1A7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
POLR2J3Q9H1A7 FOXO3B-201ENST00000395675 1928 ntBASIC21.47■■□□□ 1.03
POLR2J3Q9H1A7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
POLR2J3Q9H1A7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
POLR2J3Q9H1A7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
POLR2J3Q9H1A7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.47■■□□□ 1.03
POLR2J3Q9H1A7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.47■■□□□ 1.03
POLR2J3Q9H1A7 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.47■■□□□ 1.03
POLR2J3Q9H1A7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
POLR2J3Q9H1A7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
POLR2J3Q9H1A7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.47■■□□□ 1.03
POLR2J3Q9H1A7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
POLR2J3Q9H1A7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
POLR2J3Q9H1A7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
POLR2J3Q9H1A7 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
POLR2J3Q9H1A7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
POLR2J3Q9H1A7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
POLR2J3Q9H1A7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
POLR2J3Q9H1A7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
POLR2J3Q9H1A7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
POLR2J3Q9H1A7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
POLR2J3Q9H1A7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
POLR2J3Q9H1A7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
POLR2J3Q9H1A7 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
POLR2J3Q9H1A7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
POLR2J3Q9H1A7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.45■■□□□ 1.02
POLR2J3Q9H1A7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
POLR2J3Q9H1A7 AC012676.1-201ENST00000574705 1949 ntBASIC21.45■■□□□ 1.02
POLR2J3Q9H1A7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.45■■□□□ 1.02
POLR2J3Q9H1A7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.44■■□□□ 1.02
POLR2J3Q9H1A7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.44■■□□□ 1.02
POLR2J3Q9H1A7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.44■■□□□ 1.02
POLR2J3Q9H1A7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
POLR2J3Q9H1A7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
POLR2J3Q9H1A7 AC004812.2-201ENST00000611079 2094 ntBASIC21.44■■□□□ 1.02
POLR2J3Q9H1A7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
POLR2J3Q9H1A7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
POLR2J3Q9H1A7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
POLR2J3Q9H1A7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.43■■□□□ 1.02
POLR2J3Q9H1A7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
POLR2J3Q9H1A7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.43■■□□□ 1.02
POLR2J3Q9H1A7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
POLR2J3Q9H1A7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
POLR2J3Q9H1A7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
POLR2J3Q9H1A7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.43■■□□□ 1.02
POLR2J3Q9H1A7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
POLR2J3Q9H1A7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
POLR2J3Q9H1A7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
POLR2J3Q9H1A7 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
POLR2J3Q9H1A7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.42■■□□□ 1.02
POLR2J3Q9H1A7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
POLR2J3Q9H1A7 AC009831.1-201ENST00000580420 1582 ntBASIC21.41■■□□□ 1.02
POLR2J3Q9H1A7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
POLR2J3Q9H1A7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.41■■□□□ 1.02
POLR2J3Q9H1A7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
POLR2J3Q9H1A7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
POLR2J3Q9H1A7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
POLR2J3Q9H1A7 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
POLR2J3Q9H1A7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
POLR2J3Q9H1A7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
POLR2J3Q9H1A7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.4■■□□□ 1.02
POLR2J3Q9H1A7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
POLR2J3Q9H1A7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
POLR2J3Q9H1A7 RNF126P1-201ENST00000567452 1320 ntBASIC21.4■■□□□ 1.02
POLR2J3Q9H1A7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
POLR2J3Q9H1A7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.4■■□□□ 1.02
POLR2J3Q9H1A7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
POLR2J3Q9H1A7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
POLR2J3Q9H1A7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
POLR2J3Q9H1A7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
POLR2J3Q9H1A7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
POLR2J3Q9H1A7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.39■■□□□ 1.02
POLR2J3Q9H1A7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
POLR2J3Q9H1A7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
POLR2J3Q9H1A7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
POLR2J3Q9H1A7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
POLR2J3Q9H1A7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
POLR2J3Q9H1A7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.39■■□□□ 1.01
POLR2J3Q9H1A7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms