Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC36.91■■■■□ 3.5
CASKIN1Q8WXD9 AL136116.3-201ENST00000402907 1138 ntBASIC36.9■■■■□ 3.5
CASKIN1Q8WXD9 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
CASKIN1Q8WXD9 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC36.89■■■■□ 3.5
CASKIN1Q8WXD9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC36.88■■■■□ 3.5
CASKIN1Q8WXD9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC36.88■■■■□ 3.49
CASKIN1Q8WXD9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC36.88■■■■□ 3.49
CASKIN1Q8WXD9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC36.88■■■■□ 3.49
CASKIN1Q8WXD9 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC36.88■■■■□ 3.49
CASKIN1Q8WXD9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC36.88■■■■□ 3.49
CASKIN1Q8WXD9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC36.87■■■■□ 3.49
CASKIN1Q8WXD9 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
CASKIN1Q8WXD9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC36.87■■■■□ 3.49
CASKIN1Q8WXD9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC36.86■■■■□ 3.49
CASKIN1Q8WXD9 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC36.86■■■■□ 3.49
CASKIN1Q8WXD9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
CASKIN1Q8WXD9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC36.85■■■■□ 3.49
CASKIN1Q8WXD9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC36.85■■■■□ 3.49
CASKIN1Q8WXD9 AL356740.2-201ENST00000601559 647 ntBASIC36.85■■■■□ 3.49
CASKIN1Q8WXD9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC36.84■■■■□ 3.49
CASKIN1Q8WXD9 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC36.84■■■■□ 3.49
CASKIN1Q8WXD9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC36.84■■■■□ 3.49
CASKIN1Q8WXD9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC36.84■■■■□ 3.49
CASKIN1Q8WXD9 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC36.83■■■■□ 3.49
CASKIN1Q8WXD9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC36.83■■■■□ 3.49
CASKIN1Q8WXD9 MIR6722-201ENST00000617286 78 ntBASIC36.83■■■■□ 3.49
CASKIN1Q8WXD9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC36.82■■■■□ 3.49
CASKIN1Q8WXD9 AL139246.5-201ENST00000606645 996 ntBASIC36.82■■■■□ 3.48
CASKIN1Q8WXD9 AC110285.6-201ENST00000617652 491 ntBASIC36.82■■■■□ 3.48
CASKIN1Q8WXD9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC36.82■■■■□ 3.48
CASKIN1Q8WXD9 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC36.81■■■■□ 3.48
CASKIN1Q8WXD9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC36.81■■■■□ 3.48
CASKIN1Q8WXD9 LBH-205ENST00000407930 756 ntTSL 2 BASIC36.81■■■■□ 3.48
CASKIN1Q8WXD9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC36.81■■■■□ 3.48
CASKIN1Q8WXD9 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC36.81■■■■□ 3.48
CASKIN1Q8WXD9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC36.8■■■■□ 3.48
CASKIN1Q8WXD9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC36.8■■■■□ 3.48
CASKIN1Q8WXD9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC36.79■■■■□ 3.48
CASKIN1Q8WXD9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC36.78■■■■□ 3.48
CASKIN1Q8WXD9 AK3-203ENST00000447596 705 ntTSL 2 BASIC36.78■■■■□ 3.48
CASKIN1Q8WXD9 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC36.78■■■■□ 3.48
CASKIN1Q8WXD9 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC36.78■■■■□ 3.48
CASKIN1Q8WXD9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC36.77■■■■□ 3.48
CASKIN1Q8WXD9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC36.77■■■■□ 3.48
CASKIN1Q8WXD9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
CASKIN1Q8WXD9 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC36.77■■■■□ 3.48
CASKIN1Q8WXD9 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC36.77■■■■□ 3.48
CASKIN1Q8WXD9 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC36.77■■■■□ 3.48
CASKIN1Q8WXD9 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC36.76■■■■□ 3.48
CASKIN1Q8WXD9 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC36.76■■■■□ 3.48
CASKIN1Q8WXD9 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC36.76■■■■□ 3.48
CASKIN1Q8WXD9 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC36.76■■■■□ 3.48
CASKIN1Q8WXD9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC36.76■■■■□ 3.47
CASKIN1Q8WXD9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC36.76■■■■□ 3.47
CASKIN1Q8WXD9 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC36.76■■■■□ 3.47
CASKIN1Q8WXD9 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC36.76■■■■□ 3.47
CASKIN1Q8WXD9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC36.75■■■■□ 3.47
CASKIN1Q8WXD9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC36.75■■■■□ 3.47
CASKIN1Q8WXD9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC36.75■■■■□ 3.47
CASKIN1Q8WXD9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC36.74■■■■□ 3.47
CASKIN1Q8WXD9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC36.74■■■■□ 3.47
CASKIN1Q8WXD9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC36.74■■■■□ 3.47
CASKIN1Q8WXD9 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC36.74■■■■□ 3.47
CASKIN1Q8WXD9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC36.74■■■■□ 3.47
CASKIN1Q8WXD9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC36.73■■■■□ 3.47
CASKIN1Q8WXD9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC36.73■■■■□ 3.47
CASKIN1Q8WXD9 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC36.73■■■■□ 3.47
CASKIN1Q8WXD9 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC36.72■■■■□ 3.47
CASKIN1Q8WXD9 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC36.72■■■■□ 3.47
CASKIN1Q8WXD9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC36.72■■■■□ 3.47
CASKIN1Q8WXD9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC36.72■■■■□ 3.47
CASKIN1Q8WXD9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC36.72■■■■□ 3.47
CASKIN1Q8WXD9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC36.72■■■■□ 3.47
CASKIN1Q8WXD9 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC36.71■■■■□ 3.47
CASKIN1Q8WXD9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC36.71■■■■□ 3.47
CASKIN1Q8WXD9 MIR6089-201ENST00000616698 64 ntBASIC36.71■■■■□ 3.47
CASKIN1Q8WXD9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC36.71■■■■□ 3.47
CASKIN1Q8WXD9 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC36.7■■■■□ 3.47
CASKIN1Q8WXD9 DUSP8P4-201ENST00000399538 1761 ntBASIC36.7■■■■□ 3.47
CASKIN1Q8WXD9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC36.7■■■■□ 3.47
CASKIN1Q8WXD9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC36.7■■■■□ 3.47
CASKIN1Q8WXD9 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
CASKIN1Q8WXD9 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC36.7■■■■□ 3.47
CASKIN1Q8WXD9 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC36.69■■■■□ 3.46
CASKIN1Q8WXD9 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC36.69■■■■□ 3.46
CASKIN1Q8WXD9 RALB-208ENST00000631312 311 ntTSL 5 BASIC36.69■■■■□ 3.46
CASKIN1Q8WXD9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC36.69■■■■□ 3.46
CASKIN1Q8WXD9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC36.69■■■■□ 3.46
CASKIN1Q8WXD9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC36.69■■■■□ 3.46
CASKIN1Q8WXD9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC36.69■■■■□ 3.46
CASKIN1Q8WXD9 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC36.68■■■■□ 3.46
CASKIN1Q8WXD9 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC36.68■■■■□ 3.46
CASKIN1Q8WXD9 AC004448.1-201ENST00000458332 883 ntBASIC36.68■■■■□ 3.46
CASKIN1Q8WXD9 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC36.68■■■■□ 3.46
CASKIN1Q8WXD9 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC36.68■■■■□ 3.46
CASKIN1Q8WXD9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC36.68■■■■□ 3.46
CASKIN1Q8WXD9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC36.68■■■■□ 3.46
CASKIN1Q8WXD9 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC36.68■■■■□ 3.46
CASKIN1Q8WXD9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC36.67■■■■□ 3.46
CASKIN1Q8WXD9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC36.67■■■■□ 3.46
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms