Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LRRK2Q5S007 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRK2Q5S007 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.69■□□□□ 0.9
LRRK2Q5S007 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
LRRK2Q5S007 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRRK2Q5S007 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRK2Q5S007 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
LRRK2Q5S007 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRK2Q5S007 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LRRK2Q5S007 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRK2Q5S007 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.68■□□□□ 0.9
LRRK2Q5S007 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LRRK2Q5S007 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRK2Q5S007 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRK2Q5S007 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LRRK2Q5S007 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRK2Q5S007 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRK2Q5S007 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.67■□□□□ 0.9
LRRK2Q5S007 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRK2Q5S007 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LRRK2Q5S007 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LRRK2Q5S007 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.67■□□□□ 0.9
LRRK2Q5S007 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
LRRK2Q5S007 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRK2Q5S007 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LRRK2Q5S007 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LRRK2Q5S007 AC004448.1-201ENST00000458332 883 ntBASIC20.66■□□□□ 0.9
LRRK2Q5S007 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.66■□□□□ 0.9
LRRK2Q5S007 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
LRRK2Q5S007 RAP2CP1-201ENST00000605103 478 ntBASIC20.66■□□□□ 0.9
LRRK2Q5S007 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.66■□□□□ 0.9
LRRK2Q5S007 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.66■□□□□ 0.9
LRRK2Q5S007 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRK2Q5S007 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LRRK2Q5S007 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.65■□□□□ 0.9
LRRK2Q5S007 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
LRRK2Q5S007 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRK2Q5S007 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LRRK2Q5S007 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.65■□□□□ 0.9
LRRK2Q5S007 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.65■□□□□ 0.9
LRRK2Q5S007 MIR6722-201ENST00000617286 78 ntBASIC20.65■□□□□ 0.9
LRRK2Q5S007 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.64■□□□□ 0.9
LRRK2Q5S007 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LRRK2Q5S007 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LRRK2Q5S007 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRK2Q5S007 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LRRK2Q5S007 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LRRK2Q5S007 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
LRRK2Q5S007 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRK2Q5S007 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.63■□□□□ 0.89
LRRK2Q5S007 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
LRRK2Q5S007 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
LRRK2Q5S007 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRK2Q5S007 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRK2Q5S007 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
LRRK2Q5S007 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.63■□□□□ 0.89
LRRK2Q5S007 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRK2Q5S007 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LRRK2Q5S007 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRK2Q5S007 AC099791.1-201ENST00000416440 715 ntBASIC20.62■□□□□ 0.89
LRRK2Q5S007 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRK2Q5S007 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRK2Q5S007 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.62■□□□□ 0.89
LRRK2Q5S007 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.62■□□□□ 0.89
LRRK2Q5S007 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.62■□□□□ 0.89
LRRK2Q5S007 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRK2Q5S007 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRK2Q5S007 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.61■□□□□ 0.89
LRRK2Q5S007 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.61■□□□□ 0.89
LRRK2Q5S007 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.61■□□□□ 0.89
LRRK2Q5S007 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.61■□□□□ 0.89
LRRK2Q5S007 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRK2Q5S007 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.6■□□□□ 0.89
LRRK2Q5S007 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.6■□□□□ 0.89
LRRK2Q5S007 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRK2Q5S007 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.6■□□□□ 0.89
LRRK2Q5S007 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LRRK2Q5S007 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRK2Q5S007 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LRRK2Q5S007 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.6■□□□□ 0.89
LRRK2Q5S007 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRK2Q5S007 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRK2Q5S007 AC004911.1-201ENST00000416316 871 ntBASIC20.59■□□□□ 0.89
LRRK2Q5S007 AC233992.3-201ENST00000607491 485 ntBASIC20.59■□□□□ 0.89
LRRK2Q5S007 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LRRK2Q5S007 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRK2Q5S007 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRK2Q5S007 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.59■□□□□ 0.89
LRRK2Q5S007 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
LRRK2Q5S007 AC005703.6-201ENST00000623265 1329 ntBASIC20.58■□□□□ 0.89
LRRK2Q5S007 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.58■□□□□ 0.89
LRRK2Q5S007 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LRRK2Q5S007 AC123595.1-201ENST00000440769 1046 ntBASIC20.58■□□□□ 0.88
LRRK2Q5S007 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.58■□□□□ 0.88
LRRK2Q5S007 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LRRK2Q5S007 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
LRRK2Q5S007 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.57■□□□□ 0.88
LRRK2Q5S007 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LRRK2Q5S007 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
LRRK2Q5S007 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms