Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.151e-8■■■■■ 40.1
SUB1P53999 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.21e-8■■■■■ 40.1
SUB1P53999 DBI-205ENST00000460901 774 ntTSL 1 (best)13.5□□□□□ -0.251e-8■■■■■ 40.1
SUB1P53999 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.32□□□□□ -0.281e-8■■■■■ 40.1
SUB1P53999 C20orf27-204ENST00000399683 933 ntTSL 212.77□□□□□ -0.371e-8■■■■■ 40.1
SUB1P53999 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.35□□□□□ -0.431e-8■■■■■ 40.1
SUB1P53999 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.21□□□□□ -0.461e-8■■■■■ 40.1
SUB1P53999 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.571e-8■■■■■ 40.1
SUB1P53999 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC11.43□□□□□ -0.581e-8■■■■■ 40.1
SUB1P53999 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.651e-8■■■■■ 40.1
SUB1P53999 MCM3AP-204ENST00000467026 2671 ntTSL 1 (best)10.83□□□□□ -0.681e-8■■■■■ 40.1
SUB1P53999 CPSF6-201ENST00000266679 2229 ntTSL 1 (best) BASIC10.38□□□□□ -0.751e-8■■■■■ 40.1
SUB1P53999 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.791e-8■■■■■ 40.1
SUB1P53999 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC9.91□□□□□ -0.821e-8■■■■■ 40.1
SUB1P53999 MCM3AP-207ENST00000486937 4593 ntTSL 29.77□□□□□ -0.851e-8■■■■■ 40.1
SUB1P53999 MCM3AP-202ENST00000397708 6333 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.911e-8■■■■■ 40.1
SUB1P53999 ACSL1-210ENST00000513317 2469 ntAPPRIS ALT1 TSL 2 BASIC9.36□□□□□ -0.911e-8■■■■■ 40.1
SUB1P53999 MELK-209ENST00000541717 2363 ntTSL 2 BASIC9.31□□□□□ -0.921e-8■■■■■ 40.1
SUB1P53999 AAGAB-201ENST00000261880 2841 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.941e-8■■■■■ 40.1
SUB1P53999 DBI-204ENST00000409094 576 ntTSL 1 (best) BASIC9.12□□□□□ -0.951e-8■■■■■ 40.1
SUB1P53999 DBI-209ENST00000535757 740 ntTSL 1 (best) BASIC8.59□□□□□ -1.031e-8■■■■■ 40.1
SUB1P53999 DBI-202ENST00000355857 637 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.031e-8■■■■■ 40.1
SUB1P53999 MCM3AP-210ENST00000496607 4075 ntTSL 28.03□□□□□ -1.121e-8■■■■■ 40.1
SUB1P53999 MELK-206ENST00000536329 2283 ntTSL 1 (best) BASIC7.95□□□□□ -1.141e-8■■■■■ 40.1
SUB1P53999 DBI-208ENST00000535617 654 ntTSL 1 (best) BASIC7.74□□□□□ -1.171e-8■■■■■ 40.1
SUB1P53999 DBI-206ENST00000475783 842 ntTSL 1 (best)7.71□□□□□ -1.181e-8■■■■■ 40.1
SUB1P53999 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.271e-8■■■■■ 40.1
SUB1P53999 MELK-201ENST00000298048 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.321e-8■■■■■ 40.1
SUB1P53999 INTS4-211ENST00000535943 1382 ntTSL 5 BASIC6.57□□□□□ -1.361e-8■■■■■ 40.1
SUB1P53999 AAGAB-202ENST00000538028 1777 ntTSL 26.56□□□□□ -1.361e-8■■■■■ 40.1
SUB1P53999 HAUS1-205ENST00000588704 937 ntTSL 36.52□□□□□ -1.371e-8■■■■■ 40.1
SUB1P53999 LDHAP3-201ENST00000448312 1008 ntBASIC6.39□□□□□ -1.391e-8■■■■■ 40.1
SUB1P53999 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.411e-8■■■■■ 40.1
SUB1P53999 AC068547.1-202ENST00000637224 2827 ntAPPRIS ALT2 TSL 56.03□□□□□ -1.441e-8■■■■■ 40.1
SUB1P53999 MELK-208ENST00000536987 2125 ntTSL 2 BASIC5.98□□□□□ -1.451e-8■■■■■ 40.1
SUB1P53999 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.461e-8■■■■■ 40.1
SUB1P53999 MELK-207ENST00000536860 2342 ntTSL 2 BASIC5.8□□□□□ -1.481e-8■■■■■ 40.1
SUB1P53999 NOX1-201ENST00000217885 1734 ntTSL 1 (best) BASIC5.65□□□□□ -1.51e-8■■■■■ 40.1
SUB1P53999 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.45□□□□□ -1.541e-8■■■■■ 40.1
SUB1P53999 MELK-211ENST00000545008 2236 ntTSL 2 BASIC5.45□□□□□ -1.541e-8■■■■■ 40.1
SUB1P53999 NOX1-203ENST00000372964 661 ntTSL 2 BASIC5.2□□□□□ -1.581e-8■■■■■ 40.1
SUB1P53999 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.581e-8■■■■■ 40.1
SUB1P53999 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC5.13□□□□□ -1.591e-8■■■■■ 40.1
SUB1P53999 ARL5A-203ENST00000446896 1268 ntTSL 24.86□□□□□ -1.631e-8■■■■■ 40.1
SUB1P53999 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC4.72□□□□□ -1.651e-8■■■■■ 40.1
SUB1P53999 INTS4-201ENST00000433818 3459 ntTSL 1 (best)4.62□□□□□ -1.671e-8■■■■■ 40.1
SUB1P53999 HAUS1-208ENST00000591715 1098 ntTSL 1 (best)4.01□□□□□ -1.771e-8■■■■■ 40.1
SUB1P53999 AC068547.1-201ENST00000636024 1303 ntAPPRIS ALT2 TSL 53.94□□□□□ -1.781e-8■■■■■ 40.1
SUB1P53999 IMMP2L-208ENST00000487733 580 ntTSL 23.78□□□□□ -1.81e-8■■■■■ 40.1
SUB1P53999 PREPL-210ENST00000425263 5657 ntTSL 1 (best)3.71□□□□□ -1.821e-8■■■■■ 40.1
SUB1P53999 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.821e-8■■■■■ 40.1
SUB1P53999 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.65□□□□□ -1.821e-8■■■■■ 40.1
SUB1P53999 PREPL-211ENST00000426481 6273 ntTSL 1 (best)3.48□□□□□ -1.851e-8■■■■■ 40.1
SUB1P53999 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.45□□□□□ -1.861e-8■■■■■ 40.1
SUB1P53999 HAUS1-202ENST00000585425 370 ntTSL 31.5□□□□□ -2.171e-8■■■■■ 40.1
SUB1P53999 MARCH6-202ENST00000449913 3062 ntTSL 2 BASIC7.92□□□□□ -1.143e-7■■■■■ 40
SUB1P53999 MARCH6-210ENST00000511802 4734 ntTSL 26.95□□□□□ -1.33e-7■■■■■ 40
SUB1P53999 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC6.58□□□□□ -1.363e-7■■■■■ 40
SUB1P53999 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.413e-7■■■■■ 40
SUB1P53999 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.076e-8■■■■■ 40
SUB1P53999 DNAJC8-205ENST00000489277 1600 ntTSL 1 (best)12.53□□□□□ -0.46e-8■■■■■ 40
SUB1P53999 DNAJC8-206ENST00000603289 483 ntTSL 56.15□□□□□ -1.426e-8■■■■■ 40
SUB1P53999 COX4I1-209ENST00000565078 566 ntTSL 410.99□□□□□ -0.655e-15■■■■■ 40
SUB1P53999 RPA1-201ENST00000254719 4340 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.156e-7■■■■■ 39.9
SUB1P53999 RPA1-207ENST00000574049 3849 ntTSL 56.31□□□□□ -1.46e-7■■■■■ 39.9
SUB1P53999 ACADM-206ENST00000525808 1422 ntTSL 23.5□□□□□ -1.852e-6■■■■■ 39.9
SUB1P53999 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.23□□□□□ -0.291e-10■■■■■ 39.9
SUB1P53999 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.18□□□□□ -0.31e-10■■■■■ 39.9
SUB1P53999 SCP2-210ENST00000478631 5204 ntTSL 210.71□□□□□ -0.691e-10■■■■■ 39.9
SUB1P53999 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.751e-10■■■■■ 39.9
SUB1P53999 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC5.79□□□□□ -1.481e-10■■■■■ 39.9
SUB1P53999 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC4.56□□□□□ -1.681e-10■■■■■ 39.9
SUB1P53999 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.59□□□□□ -1.831e-10■■■■■ 39.9
SUB1P53999 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.35□□□□□ -1.871e-10■■■■■ 39.9
SUB1P53999 SCP2-216ENST00000533119 742 ntTSL 52.75□□□□□ -1.971e-10■■■■■ 39.9
SUB1P53999 SCP2-211ENST00000484100 671 ntTSL 22.72□□□□□ -1.971e-10■■■■■ 39.9
SUB1P53999 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.477e-10■■■■■ 39.8
SUB1P53999 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.037e-10■■■■■ 39.8
SUB1P53999 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.976e-7■■■■■ 39.7
SUB1P53999 SON-208ENST00000455528 8394 ntTSL 1 (best)11.29□□□□□ -0.62e-7■■■■■ 39.7
SUB1P53999 SON-202ENST00000356577 8813 ntTSL 1 (best) BASIC10.4□□□□□ -0.742e-7■■■■■ 39.7
SUB1P53999 SON-217ENST00000478183 1818 ntTSL 1 (best)7.66□□□□□ -1.182e-7■■■■■ 39.7
SUB1P53999 SON-207ENST00000436227 5269 ntAPPRIS P1 TSL 57.57□□□□□ -1.22e-7■■■■■ 39.7
SUB1P53999 SON-210ENST00000465834 957 ntTSL 35.73□□□□□ -1.492e-7■■■■■ 39.7
SUB1P53999 SON-219ENST00000491794 995 ntTSL 24.12□□□□□ -1.752e-7■■■■■ 39.7
SUB1P53999 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC3.8□□□□□ -1.82e-7■■■■■ 39.7
SUB1P53999 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.35e-10■■■■■ 39.7
SUB1P53999 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.91□□□□□ -0.55e-10■■■■■ 39.7
SUB1P53999 TMEM258-203ENST00000535297 395 ntTSL 210.41□□□□□ -0.745e-10■■■■■ 39.7
SUB1P53999 TMEM258-202ENST00000535042 921 ntTSL 310.08□□□□□ -0.85e-10■■■■■ 39.7
SUB1P53999 TMEM258-208ENST00000545210 579 ntTSL 38.12□□□□□ -1.115e-10■■■■■ 39.7
SUB1P53999 TMEM258-201ENST00000257262 468 ntTSL 36.47□□□□□ -1.375e-10■■■■■ 39.7
SUB1P53999 TMEM258-206ENST00000541893 517 ntTSL 53.93□□□□□ -1.785e-10■■■■■ 39.7
SUB1P53999 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.11□□□□□ -0.312e-9■■■■■ 39.6
SUB1P53999 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.492e-9■■■■■ 39.6
SUB1P53999 PDHX-204ENST00000477173 545 ntTSL 33.75□□□□□ -1.812e-9■■■■■ 39.6
SUB1P53999 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.886e-14■■■■■ 39.6
SUB1P53999 AL365205.1-201ENST00000456057 3947 ntTSL 213.28□□□□□ -0.281e-6■■■■■ 39.6
SUB1P53999 AL365205.1-203ENST00000335515 2871 ntTSL 211.05□□□□□ -0.641e-6■■■■■ 39.6
SUB1P53999 AL365205.1-202ENST00000487182 3043 ntTSL 210.09□□□□□ -0.791e-6■■■■■ 39.6
Retrieved 100 of 11,644 protein–RNA pairs in 553.6 ms