RNA–Protein interactions for RNA: ENST00000513317.5

ACSL1-210, Transcript of acyl-CoA synthetase long chain family member 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ACSL1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL1-210ENST00000513317 NISCHQ9Y2I1 1504 aa22.7■■□□□ 1.22
ACSL1-210ENST00000513317 CCDC180Q9P1Z9 1646 aa20.09■□□□□ 0.81
ACSL1-210ENST00000513317 PELP1Q8IZL8 1130 aaKnown RBP19.59■□□□□ 0.73
ACSL1-210ENST00000513317 HRCP23327 699 aa19.58■□□□□ 0.72
ACSL1-210ENST00000513317 ABCC9O60706 1549 aa19.09■□□□□ 0.65
ACSL1-210ENST00000513317 MYT1Q01538 1121 aa19.08■□□□□ 0.64
ACSL1-210ENST00000513317 ZCCHC6Q5VYS8 1495 aaKnown RBP19.03■□□□□ 0.64
ACSL1-210ENST00000513317 SUPT5HO00267 1087 aaKnown RBP19.02■□□□□ 0.64
ACSL1-210ENST00000513317 PCGF6Q9BYE7 350 aa19.02■□□□□ 0.64
ACSL1-210ENST00000513317 SHROOM4Q9ULL8 1493 aa18.99■□□□□ 0.63
ACSL1-210ENST00000513317 PPARGC1BQ86YN6 1023 aaKnown RBP18.93■□□□□ 0.62
ACSL1-210ENST00000513317 DCAF1Q9Y4B6 1507 aa18.87■□□□□ 0.61
ACSL1-210ENST00000513317 MYO15BQ96JP2 1530 aa18.86■□□□□ 0.61
ACSL1-210ENST00000513317 CHIC1Q5VXU3 224 aa18.85■□□□□ 0.61
ACSL1-210ENST00000513317 NACADO15069 1562 aa18.73■□□□□ 0.59
ACSL1-210ENST00000513317 RB1CC1Q8TDY2 1594 aa18.65■□□□□ 0.58
ACSL1-210ENST00000513317 ZEB1P37275 1124 aaPredicted RBP18.59■□□□□ 0.57
ACSL1-210ENST00000513317 DCAF8L2P0C7V8 631 aa18.59■□□□□ 0.57
ACSL1-210ENST00000513317 TRIM26Q12899 539 aaPredicted RBP18.57■□□□□ 0.56
ACSL1-210ENST00000513317 SCAF1Q9H7N4 1312 aaKnown RBP18.46■□□□□ 0.55
ACSL1-210ENST00000513317 LOC105371045A0A1W2PR82 267 aa18.29■□□□□ 0.52
ACSL1-210ENST00000513317 SCRIBQ14160 1630 aa18.27■□□□□ 0.51
ACSL1-210ENST00000513317 UNC13AQ9UPW8 1703 aa18.26■□□□□ 0.51
ACSL1-210ENST00000513317 TTBK1Q5TCY1 1321 aaPredicted RBP18.14■□□□□ 0.49
ACSL1-210ENST00000513317 ACIN1Q9UKV3 1341 aaKnown RBP18.1■□□□□ 0.49
ACSL1-210ENST00000513317 BICRAQ9NZM4 1560 aa18.05■□□□□ 0.48
ACSL1-210ENST00000513317 CENPBP07199 599 aaPredicted RBP17.97■□□□□ 0.47
ACSL1-210ENST00000513317 NEUROD1Q13562 356 aa17.93■□□□□ 0.46
ACSL1-210ENST00000513317 GTF3C3Q9Y5Q9 886 aa17.88■□□□□ 0.45
ACSL1-210ENST00000513317 PABPN1Q86U42 306 aaKnown RBP eCLIP17.83■□□□□ 0.45
ACSL1-210ENST00000513317 DIEXFQ68CQ4 756 aaKnown RBP17.74■□□□□ 0.43
ACSL1-210ENST00000513317 TRIM41Q8WV44 630 aa17.71■□□□□ 0.43
ACSL1-210ENST00000513317 CCER1Q8TC90 406 aaPredicted RBP17.67■□□□□ 0.42
ACSL1-210ENST00000513317 BCL11AQ9H165 835 aa17.67■□□□□ 0.42
ACSL1-210ENST00000513317 BAZ1AQ9NRL2 1556 aaPredicted RBP17.59■□□□□ 0.41
ACSL1-210ENST00000513317 CECR2Q9BXF3 1484 aa17.58■□□□□ 0.4
ACSL1-210ENST00000513317 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.58■□□□□ 0.4
ACSL1-210ENST00000513317 PRKCSHP14314 528 aaPredicted RBP17.55■□□□□ 0.4
ACSL1-210ENST00000513317 SMARCA4P51532 1647 aa17.55■□□□□ 0.4
ACSL1-210ENST00000513317 FAM9AQ8IZU1 332 aaPredicted RBP17.54■□□□□ 0.4
ACSL1-210ENST00000513317 EIF4G1Q04637 1599 aaKnown RBP17.53■□□□□ 0.4
ACSL1-210ENST00000513317 MROH2BQ7Z745 1585 aa17.47■□□□□ 0.39
ACSL1-210ENST00000513317 DNAJC5BQ9UF47 199 aa17.44■□□□□ 0.38
ACSL1-210ENST00000513317 ZNF316A6NFI3 1004 aaPredicted RBP17.43■□□□□ 0.38
ACSL1-210ENST00000513317 SLC24A1O60721 1099 aa17.43■□□□□ 0.38
ACSL1-210ENST00000513317 RSF1Q96T23 1441 aaPredicted RBP17.43■□□□□ 0.38
ACSL1-210ENST00000513317 PEG3Q9GZU2 1588 aa17.41■□□□□ 0.38
ACSL1-210ENST00000513317 SMARCA2P51531 1590 aa17.35■□□□□ 0.37
ACSL1-210ENST00000513317 CC2D2AQ9P2K1 1620 aa17.35■□□□□ 0.37
ACSL1-210ENST00000513317 EHMT2Q96KQ7 1210 aa17.33■□□□□ 0.37
ACSL1-210ENST00000513317 WIZO95785 1651 aa17.32■□□□□ 0.36
ACSL1-210ENST00000513317 YTHDC1Q96MU7 727 aaKnown RBP17.31■□□□□ 0.36
ACSL1-210ENST00000513317 ATAD2BQ9ULI0 1458 aa17.3■□□□□ 0.36
ACSL1-210ENST00000513317 CLSPNQ9HAW4 1339 aa17.3■□□□□ 0.36
ACSL1-210ENST00000513317 HMGXB3Q12766 1538 aa17.25■□□□□ 0.35
ACSL1-210ENST00000513317 NCAPD3P42695 1498 aa17.24■□□□□ 0.35
ACSL1-210ENST00000513317 WRNQ14191 1432 aaPredicted RBP eCLIP17.23■□□□□ 0.35
ACSL1-210ENST00000513317 TOP2AP11388 1531 aaKnown RBP17.21■□□□□ 0.35
ACSL1-210ENST00000513317 MIER1Q8N108 512 aa17.21■□□□□ 0.34
ACSL1-210ENST00000513317 ANP32EQ9BTT0 268 aa17.21■□□□□ 0.34
ACSL1-210ENST00000513317 BAZ1BQ9UIG0 1483 aaKnown RBP17.19■□□□□ 0.34
ACSL1-210ENST00000513317 ERICH6Q7L0X2 663 aa17.19■□□□□ 0.34
ACSL1-210ENST00000513317 APLP2Q06481 763 aa17.04■□□□□ 0.32
ACSL1-210ENST00000513317 SUPT16HQ9Y5B9 1047 aaKnown RBP17.03■□□□□ 0.32
ACSL1-210ENST00000513317 CSRNP3Q8WYN3 585 aa17.02■□□□□ 0.31
ACSL1-210ENST00000513317 CEP162Q5TB80 1403 aa17.01■□□□□ 0.31
ACSL1-210ENST00000513317 TSHZ2Q9NRE2 1034 aa16.97■□□□□ 0.31
ACSL1-210ENST00000513317 TNIKQ9UKE5 1360 aa16.97■□□□□ 0.31
ACSL1-210ENST00000513317 CCDC88BA6NC98 1476 aa16.94■□□□□ 0.3
ACSL1-210ENST00000513317 EEA1Q15075 1411 aa16.86■□□□□ 0.29
ACSL1-210ENST00000513317 HNRNPUL2Q1KMD3 747 aaKnown RBP16.81■□□□□ 0.28
ACSL1-210ENST00000513317 UBTFP17480 764 aaKnown RBP16.78■□□□□ 0.28
ACSL1-210ENST00000513317 PRDM2Q13029 1718 aa16.78■□□□□ 0.28
ACSL1-210ENST00000513317 LAMC3Q9Y6N6 1575 aa16.76■□□□□ 0.27
ACSL1-210ENST00000513317 CFTRP13569 1480 aa16.75■□□□□ 0.27
ACSL1-210ENST00000513317 GOLGA3Q08378 1498 aa16.73■□□□□ 0.27
ACSL1-210ENST00000513317 CADPSQ9ULU8 1353 aa16.73■□□□□ 0.27
ACSL1-210ENST00000513317 ABCC8Q09428 1581 aa16.7■□□□□ 0.26
ACSL1-210ENST00000513317 SOGA1O94964 1423 aa16.69■□□□□ 0.26
ACSL1-210ENST00000513317 NESP48681 1621 aa16.65■□□□□ 0.26
ACSL1-210ENST00000513317 RBM19Q9Y4C8 960 aaKnown RBP16.59■□□□□ 0.25
ACSL1-210ENST00000513317 VPS8Q8N3P4 1428 aa16.58■□□□□ 0.25
ACSL1-210ENST00000513317 DHX57Q6P158 1386 aaKnown RBP16.58■□□□□ 0.24
ACSL1-210ENST00000513317 PDS5BQ9NTI5 1447 aa16.57■□□□□ 0.24
ACSL1-210ENST00000513317 NEFLP07196 543 aa16.57■□□□□ 0.24
ACSL1-210ENST00000513317 FKBP8Q14318 412 aa16.56■□□□□ 0.24
ACSL1-210ENST00000513317 CLIP1P30622 1438 aa16.56■□□□□ 0.24
ACSL1-210ENST00000513317 CEP164Q9UPV0 1460 aa16.56■□□□□ 0.24
ACSL1-210ENST00000513317 FANCD2Q9BXW9 1451 aa16.56■□□□□ 0.24
ACSL1-210ENST00000513317 KIF21AQ7Z4S6 1674 aa16.54■□□□□ 0.24
ACSL1-210ENST00000513317 RUSC2Q8N2Y8 1516 aa16.54■□□□□ 0.24
ACSL1-210ENST00000513317 BCANQ96GW7 911 aa16.54■□□□□ 0.24
ACSL1-210ENST00000513317 KIF21BO75037 1637 aa16.52■□□□□ 0.24
ACSL1-210ENST00000513317 MYT1LQ9UL68 1186 aa16.49■□□□□ 0.23
ACSL1-210ENST00000513317 ANO8Q9HCE9 1232 aaPredicted RBP16.48■□□□□ 0.23
ACSL1-210ENST00000513317 AEBP2Q6ZN18 517 aaPredicted RBP16.45■□□□□ 0.22
ACSL1-210ENST00000513317 ERCC6Q03468 1493 aa16.44■□□□□ 0.22
ACSL1-210ENST00000513317 FANCIQ9NVI1 1328 aa16.42■□□□□ 0.22
ACSL1-210ENST00000513317 BIVM-ERCC5R4GMW8 1640 aa16.41■□□□□ 0.22
ACSL1-210ENST00000513317 MRC2Q9UBG0 1479 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms