RNA–Protein interactions for RNA: ENST00000496607.5

MCM3AP-210, Transcript of minichromosome maintenance complex component 3 associated protein, humanhuman

TSL 2

Gene MCM3AP, Length 4,075 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3AP-210ENST00000496607 NISCHQ9Y2I1 1504 aa19.03■□□□□ 0.64
MCM3AP-210ENST00000496607 DCAF8L2P0C7V8 631 aa17.06■□□□□ 0.32
MCM3AP-210ENST00000496607 SHROOM4Q9ULL8 1493 aa17■□□□□ 0.31
MCM3AP-210ENST00000496607 SUPT5HO00267 1087 aaKnown RBP16.83■□□□□ 0.28
MCM3AP-210ENST00000496607 ZCCHC6Q5VYS8 1495 aaKnown RBP15.98■□□□□ 0.15
MCM3AP-210ENST00000496607 EHMT2Q96KQ7 1210 aa15.9■□□□□ 0.14
MCM3AP-210ENST00000496607 CHIC1Q5VXU3 224 aa15.89■□□□□ 0.13
MCM3AP-210ENST00000496607 CCDC180Q9P1Z9 1646 aa15.88■□□□□ 0.13
MCM3AP-210ENST00000496607 PCGF6Q9BYE7 350 aa15.76■□□□□ 0.11
MCM3AP-210ENST00000496607 FAM9AQ8IZU1 332 aaPredicted RBP15.68■□□□□ 0.1
MCM3AP-210ENST00000496607 LOC105371045A0A1W2PR82 267 aa15.63■□□□□ 0.09
MCM3AP-210ENST00000496607 TRIM41Q8WV44 630 aa15.57■□□□□ 0.08
MCM3AP-210ENST00000496607 ABCC9O60706 1549 aa15.49■□□□□ 0.07
MCM3AP-210ENST00000496607 MYO15BQ96JP2 1530 aa15.45■□□□□ 0.06
MCM3AP-210ENST00000496607 HRCP23327 699 aa15.42■□□□□ 0.06
MCM3AP-210ENST00000496607 SCRIBQ14160 1630 aa15.37■□□□□ 0.05
MCM3AP-210ENST00000496607 DCAF1Q9Y4B6 1507 aa15.33■□□□□ 0.04
MCM3AP-210ENST00000496607 TTBK1Q5TCY1 1321 aaPredicted RBP15.29■□□□□ 0.04
MCM3AP-210ENST00000496607 TRIM26Q12899 539 aaPredicted RBP15.26■□□□□ 0.03
MCM3AP-210ENST00000496607 PPARGC1BQ86YN6 1023 aaKnown RBP15.26■□□□□ 0.03
MCM3AP-210ENST00000496607 RSF1Q96T23 1441 aaPredicted RBP15.17■□□□□ 0.02
MCM3AP-210ENST00000496607 PABPN1Q86U42 306 aaKnown RBP eCLIP15.06■□□□□ 02e-7■■■■■ 27.8
MCM3AP-210ENST00000496607 RANGAP1P46060 587 aaPredicted RBP15.04■□□□□ -0
MCM3AP-210ENST00000496607 ZEB1P37275 1124 aaPredicted RBP15.02□□□□□ -0.01
MCM3AP-210ENST00000496607 UBTFP17480 764 aaKnown RBP15.01□□□□□ -0.01
MCM3AP-210ENST00000496607 CECR2Q9BXF3 1484 aa14.99□□□□□ -0.01
MCM3AP-210ENST00000496607 NACADO15069 1562 aa14.95□□□□□ -0.02
MCM3AP-210ENST00000496607 CCER1Q8TC90 406 aaPredicted RBP14.95□□□□□ -0.02
MCM3AP-210ENST00000496607 RB1CC1Q8TDY2 1594 aa14.91□□□□□ -0.02
MCM3AP-210ENST00000496607 APLP2Q06481 763 aa14.85□□□□□ -0.03
MCM3AP-210ENST00000496607 MROH2BQ7Z745 1585 aa14.85□□□□□ -0.03
MCM3AP-210ENST00000496607 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.82□□□□□ -0.04
MCM3AP-210ENST00000496607 WIZO95785 1651 aa14.71□□□□□ -0.05
MCM3AP-210ENST00000496607 CSRNP3Q8WYN3 585 aa14.7□□□□□ -0.06
MCM3AP-210ENST00000496607 BAZ1AQ9NRL2 1556 aaPredicted RBP14.68□□□□□ -0.06
MCM3AP-210ENST00000496607 HNRNPUL2Q1KMD3 747 aaKnown RBP14.64□□□□□ -0.07
MCM3AP-210ENST00000496607 CCDC88BA6NC98 1476 aa14.55□□□□□ -0.08
MCM3AP-210ENST00000496607 ABCC8Q09428 1581 aa14.55□□□□□ -0.08
MCM3AP-210ENST00000496607 SOGA1O94964 1423 aa14.51□□□□□ -0.09
MCM3AP-210ENST00000496607 ATP1B4Q9UN42 357 aaPredicted RBP14.49□□□□□ -0.09
MCM3AP-210ENST00000496607 CEP162Q5TB80 1403 aa14.48□□□□□ -0.09
MCM3AP-210ENST00000496607 TOP2AP11388 1531 aaKnown RBP14.46□□□□□ -0.09
MCM3AP-210ENST00000496607 DIEXFQ68CQ4 756 aaKnown RBP14.45□□□□□ -0.1
MCM3AP-210ENST00000496607 CENPBP07199 599 aaPredicted RBP14.45□□□□□ -0.1
MCM3AP-210ENST00000496607 WRNQ14191 1432 aaPredicted RBP eCLIP14.45□□□□□ -0.1
MCM3AP-210ENST00000496607 YTHDC1Q96MU7 727 aaKnown RBP14.44□□□□□ -0.1
MCM3AP-210ENST00000496607 SMARCA4P51532 1647 aa14.44□□□□□ -0.1
MCM3AP-210ENST00000496607 ITGAEP38570 1179 aa14.42□□□□□ -0.1
MCM3AP-210ENST00000496607 TNIKQ9UKE5 1360 aa14.4□□□□□ -0.1
MCM3AP-210ENST00000496607 EEA1Q15075 1411 aa14.38□□□□□ -0.11
MCM3AP-210ENST00000496607 BAZ1BQ9UIG0 1483 aaKnown RBP14.38□□□□□ -0.11
MCM3AP-210ENST00000496607 GOLGA3Q08378 1498 aa14.36□□□□□ -0.11
MCM3AP-210ENST00000496607 RUSC2Q8N2Y8 1516 aa14.35□□□□□ -0.11
MCM3AP-210ENST00000496607 SMARCA2P51531 1590 aa14.34□□□□□ -0.11
MCM3AP-210ENST00000496607 CLIP1P30622 1438 aa14.33□□□□□ -0.12
MCM3AP-210ENST00000496607 ZNF316A6NFI3 1004 aaPredicted RBP14.27□□□□□ -0.13
MCM3AP-210ENST00000496607 CEP164Q9UPV0 1460 aa14.26□□□□□ -0.13
MCM3AP-210ENST00000496607 ATAD2BQ9ULI0 1458 aa14.23□□□□□ -0.13
MCM3AP-210ENST00000496607 P3H3Q8IVL6 736 aa14.2□□□□□ -0.14
MCM3AP-210ENST00000496607 SCAF1Q9H7N4 1312 aaKnown RBP14.17□□□□□ -0.14
MCM3AP-210ENST00000496607 ACIN1Q9UKV3 1341 aaKnown RBP14.17□□□□□ -0.14
MCM3AP-210ENST00000496607 GTF3C3Q9Y5Q9 886 aa14.16□□□□□ -0.14
MCM3AP-210ENST00000496607 FAM50AQ14320 339 aaKnown RBP14.15□□□□□ -0.14
MCM3AP-210ENST00000496607 NEUROD1Q13562 356 aa14.14□□□□□ -0.15
MCM3AP-210ENST00000496607 RAPGEF2Q9Y4G8 1499 aa14.11□□□□□ -0.15
MCM3AP-210ENST00000496607 BICRAQ9NZM4 1560 aa14.11□□□□□ -0.15
MCM3AP-210ENST00000496607 UNC13AQ9UPW8 1703 aa14.1□□□□□ -0.15
MCM3AP-210ENST00000496607 VPS8Q8N3P4 1428 aa14.1□□□□□ -0.15
MCM3AP-210ENST00000496607 PELP1Q8IZL8 1130 aaKnown RBP14.09□□□□□ -0.15
MCM3AP-210ENST00000496607 KIF27Q86VH2 1401 aa14.08□□□□□ -0.16
MCM3AP-210ENST00000496607 SYNJ1O43426 1573 aa14.05□□□□□ -0.16
MCM3AP-210ENST00000496607 EIF4G1Q04637 1599 aaKnown RBP14.05□□□□□ -0.16
MCM3AP-210ENST00000496607 KANK4Q5T7N3 995 aaPredicted RBP14.03□□□□□ -0.16
MCM3AP-210ENST00000496607 MIER1Q8N108 512 aa14.03□□□□□ -0.16
MCM3AP-210ENST00000496607 CUX2O14529 1486 aa13.96□□□□□ -0.17
MCM3AP-210ENST00000496607 ARID3CA6NKF2 412 aa13.94□□□□□ -0.18
MCM3AP-210ENST00000496607 CARMIL1Q5VZK9 1371 aa13.91□□□□□ -0.18
MCM3AP-210ENST00000496607 KIF21BO75037 1637 aa13.9□□□□□ -0.18
MCM3AP-210ENST00000496607 PEG3Q9GZU2 1588 aa13.89□□□□□ -0.19
MCM3AP-210ENST00000496607 NCAPD3P42695 1498 aa13.89□□□□□ -0.19
MCM3AP-210ENST00000496607 CNGB1Q14028 1251 aaPredicted RBP13.88□□□□□ -0.19
MCM3AP-210ENST00000496607 CCNB3Q8WWL7 1395 aa13.87□□□□□ -0.19
MCM3AP-210ENST00000496607 CADPSQ9ULU8 1353 aa13.86□□□□□ -0.19
MCM3AP-210ENST00000496607 TRIM52Q96A61 297 aa13.83□□□□□ -0.2
MCM3AP-210ENST00000496607 TOP2BQ02880 1626 aa13.83□□□□□ -0.2
MCM3AP-210ENST00000496607 HIRIP3Q9BW71 556 aaPredicted RBP13.8□□□□□ -0.2
MCM3AP-210ENST00000496607 CLSPNQ9HAW4 1339 aa13.79□□□□□ -0.2
MCM3AP-210ENST00000496607 DDX10Q13206 875 aaKnown RBP13.79□□□□□ -0.2
MCM3AP-210ENST00000496607 CUX1P39880 1505 aa13.79□□□□□ -0.2
MCM3AP-210ENST00000496607 PRXQ9BXM0 1461 aa13.79□□□□□ -0.2
MCM3AP-210ENST00000496607 SIN3AQ96ST3 1273 aa13.79□□□□□ -0.2
MCM3AP-210ENST00000496607 IGF1RP08069 1367 aa13.78□□□□□ -0.2
MCM3AP-210ENST00000496607 CFTRP13569 1480 aa13.78□□□□□ -0.2
MCM3AP-210ENST00000496607 ARAP1Q96P48 1450 aa13.78□□□□□ -0.2
MCM3AP-210ENST00000496607 MTUS2Q5JR59 1369 aa13.78□□□□□ -0.2
MCM3AP-210ENST00000496607 DHX57Q6P158 1386 aaKnown RBP13.77□□□□□ -0.2
MCM3AP-210ENST00000496607 NEFLP07196 543 aa13.76□□□□□ -0.21
MCM3AP-210ENST00000496607 CHIC2Q9UKJ5 165 aa13.75□□□□□ -0.21
MCM3AP-210ENST00000496607 HMGXB3Q12766 1538 aa13.74□□□□□ -0.21
MCM3AP-210ENST00000496607 FGD5Q6ZNL6 1462 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms