RNA–Protein interactions for RNA: ENST00000435345.6

SCP2-207, Transcript of sterol carrier protein 2, humanhuman

TSL 1 (best) BASIC

Gene SCP2, Length 894 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-207ENST00000435345 AEBP2Q6ZN18 517 aaPredicted RBP28.55■■■□□ 2.16
SCP2-207ENST00000435345 CHIC1Q5VXU3 224 aa27.66■■■□□ 2.02
SCP2-207ENST00000435345 PHF23Q9BUL5 403 aaPredicted RBP24.32■■□□□ 1.48
SCP2-207ENST00000435345 SENP3Q9H4L4 574 aaPredicted RBP24.22■■□□□ 1.47
SCP2-207ENST00000435345 FOXD1Q16676 465 aa22.53■■□□□ 1.2
SCP2-207ENST00000435345 PLPPR3Q6T4P5 718 aa22.34■■□□□ 1.17
SCP2-207ENST00000435345 PPP6R1Q9UPN7 881 aa21.52■■□□□ 1.04
SCP2-207ENST00000435345 ADRA2BP18089 450 aa21.48■■□□□ 1.03
SCP2-207ENST00000435345 PIAS4Q8N2W9 510 aaPredicted RBP21.17■□□□□ 0.98
SCP2-207ENST00000435345 MSH5O43196 834 aa20.83■□□□□ 0.93
SCP2-207ENST00000435345 PPP4R3CPQ6ZMV5 832 aa19.67■□□□□ 0.74
SCP2-207ENST00000435345 SCAF1Q9H7N4 1312 aaKnown RBP19.61■□□□□ 0.73
SCP2-207ENST00000435345 MAPK8IP2Q13387 824 aaPredicted RBP19.55■□□□□ 0.72
SCP2-207ENST00000435345 POTEDQ86YR6 584 aa19.37■□□□□ 0.69
SCP2-207ENST00000435345 DMRT2Q9Y5R5 561 aa19.32■□□□□ 0.68
SCP2-207ENST00000435345 CNKSR2Q8WXI2 1034 aa19.16■□□□□ 0.66
SCP2-207ENST00000435345 NCBP3Q53F19 620 aaKnown RBP19.06■□□□□ 0.64
SCP2-207ENST00000435345 KCNA4P22459 653 aa18.99■□□□□ 0.63
SCP2-207ENST00000435345 RNF216Q9NWF9 866 aaPredicted RBP18.85■□□□□ 0.61
SCP2-207ENST00000435345 HOXD11P31277 338 aaPredicted RBP18.84■□□□□ 0.61
SCP2-207ENST00000435345 NPM3O75607 178 aaKnown RBP18.82■□□□□ 0.6
SCP2-207ENST00000435345 NISCHQ9Y2I1 1504 aa18.44■□□□□ 0.54
SCP2-207ENST00000435345 DCAF8L1A6NGE4 600 aa18.44■□□□□ 0.54
SCP2-207ENST00000435345 DNAJC5BQ9UF47 199 aa18.33■□□□□ 0.52
SCP2-207ENST00000435345 SLC4A1APQ9BWU0 796 aaKnown RBP18.02■□□□□ 0.48
SCP2-207ENST00000435345 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.91■□□□□ 0.468e-10■□□□□ 9.9
SCP2-207ENST00000435345 RNF39Q9H2S5 420 aa17.85■□□□□ 0.45
SCP2-207ENST00000435345 SLC4A2P04920 1241 aa17.84■□□□□ 0.45
SCP2-207ENST00000435345 U3KPZ7 1027 aaPredicted RBP17.64■□□□□ 0.41
SCP2-207ENST00000435345 C1QBPQ07021 282 aaKnown RBP17.61■□□□□ 0.41
SCP2-207ENST00000435345 FOXD4L1Q9NU39 408 aa17.52■□□□□ 0.4
SCP2-207ENST00000435345 CACNB1Q02641 598 aaPredicted RBP17.51■□□□□ 0.39
SCP2-207ENST00000435345 ZBTB22O15209 634 aa17.49■□□□□ 0.39
SCP2-207ENST00000435345 ABCC9O60706 1549 aa17.46■□□□□ 0.39
SCP2-207ENST00000435345 MYCNP04198 464 aaPredicted RBP17.39■□□□□ 0.37
SCP2-207ENST00000435345 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.3■□□□□ 0.36
SCP2-207ENST00000435345 HNRNPUL2Q1KMD3 747 aaKnown RBP17.3■□□□□ 0.36
SCP2-207ENST00000435345 EHMT2Q96KQ7 1210 aa17.25■□□□□ 0.35
SCP2-207ENST00000435345 SAMD1Q6SPF0 538 aaPredicted RBP17.24■□□□□ 0.35
SCP2-207ENST00000435345 SPINK5Q9NQ38 1064 aaPredicted RBP17.21■□□□□ 0.35
SCP2-207ENST00000435345 CSRNP3Q8WYN3 585 aa17.19■□□□□ 0.34
SCP2-207ENST00000435345 APLP2Q06481 763 aa17.16■□□□□ 0.34
SCP2-207ENST00000435345 CAPN15O75808 1086 aa17.11■□□□□ 0.33
SCP2-207ENST00000435345 TRHP20396 242 aaPredicted RBP16.99■□□□□ 0.31
SCP2-207ENST00000435345 ZNF219Q9P2Y4 722 aaPredicted RBP16.98■□□□□ 0.31
SCP2-207ENST00000435345 ATF5Q9Y2D1 282 aaPredicted RBP16.97■□□□□ 0.31
SCP2-207ENST00000435345 ATXN8OSP0DMR3 200 aa16.93■□□□□ 0.3
SCP2-207ENST00000435345 DSG3P32926 999 aa16.91■□□□□ 0.3
SCP2-207ENST00000435345 CCDC180Q9P1Z9 1646 aa16.85■□□□□ 0.29
SCP2-207ENST00000435345 ABCB7O75027 752 aa16.79■□□□□ 0.28
SCP2-207ENST00000435345 POLA2Q14181 598 aa16.68■□□□□ 0.26
SCP2-207ENST00000435345 ZBTB12Q9Y330 459 aaPredicted RBP16.36■□□□□ 0.21
SCP2-207ENST00000435345 RB1CC1Q8TDY2 1594 aa16.33■□□□□ 0.2
SCP2-207ENST00000435345 FBLN2P98095 1184 aa16.22■□□□□ 0.19
SCP2-207ENST00000435345 MKRN4PQ13434 485 aaPredicted RBP16.22■□□□□ 0.19
SCP2-207ENST00000435345 OSCARQ8IYS5 282 aa16.13■□□□□ 0.17
SCP2-207ENST00000435345 PABPN1Q86U42 306 aaKnown RBP eCLIP16.1■□□□□ 0.17
SCP2-207ENST00000435345 RBM42Q9BTD8 480 aaKnown RBP16.09■□□□□ 0.17
SCP2-207ENST00000435345 NACADO15069 1562 aa16.05■□□□□ 0.16
SCP2-207ENST00000435345 UNC13AQ9UPW8 1703 aa15.96■□□□□ 0.15
SCP2-207ENST00000435345 SPDYE2BA6NHP3 402 aa15.93■□□□□ 0.14
SCP2-207ENST00000435345 SPDYE6P0CI01 402 aa15.93■□□□□ 0.14
SCP2-207ENST00000435345 SPDYE2Q495Y8 402 aa15.93■□□□□ 0.14
SCP2-207ENST00000435345 DNAJC5Q9H3Z4 198 aa15.9■□□□□ 0.14
SCP2-207ENST00000435345 BICRAQ9NZM4 1560 aa15.89■□□□□ 0.13
SCP2-207ENST00000435345 AKT1S1Q96B36 256 aa15.86■□□□□ 0.13
SCP2-207ENST00000435345 ZNF692Q9BU19 519 aaPredicted RBP15.81■□□□□ 0.12
SCP2-207ENST00000435345 SSUH2Q9Y2M2 353 aa15.8■□□□□ 0.12
SCP2-207ENST00000435345 CECR2Q9BXF3 1484 aa15.78■□□□□ 0.12
SCP2-207ENST00000435345 DCAF8L2P0C7V8 631 aa15.75■□□□□ 0.11
SCP2-207ENST00000435345 CC2D2AQ9P2K1 1620 aa15.74■□□□□ 0.11
SCP2-207ENST00000435345 REM2Q8IYK8 340 aaPredicted RBP15.72■□□□□ 0.11
SCP2-207ENST00000435345 SPDYE4A6NLX3 237 aa15.71■□□□□ 0.11
SCP2-207ENST00000435345 SHROOM4Q9ULL8 1493 aa15.62■□□□□ 0.09
SCP2-207ENST00000435345 MYO15BQ96JP2 1530 aa15.62■□□□□ 0.09
SCP2-207ENST00000435345 EIF4G1Q04637 1599 aaKnown RBP15.56■□□□□ 0.08
SCP2-207ENST00000435345 PITPNM1O00562 1244 aa15.55■□□□□ 0.08
SCP2-207ENST00000435345 FKBP8Q14318 412 aa15.53■□□□□ 0.08
SCP2-207ENST00000435345 CHRDL2Q6WN34 429 aa15.52■□□□□ 0.08
SCP2-207ENST00000435345 SPDYE1Q8NFV5 336 aaPredicted RBP15.5■□□□□ 0.07
SCP2-207ENST00000435345 PROM2Q8N271 834 aa15.47■□□□□ 0.07
SCP2-207ENST00000435345 CLEC11AQ9Y240 323 aa15.42■□□□□ 0.06
SCP2-207ENST00000435345 SCRIBQ14160 1630 aa15.35■□□□□ 0.05
SCP2-207ENST00000435345 FXR2P51116 673 aaKnown RBP eCLIP15.31■□□□□ 0.04
SCP2-207ENST00000435345 CUX2O14529 1486 aa15.3■□□□□ 0.04
SCP2-207ENST00000435345 PIP4P2Q8N4L2 257 aa15.29■□□□□ 0.04
SCP2-207ENST00000435345 STAG3Q9UJ98 1225 aa15.29■□□□□ 0.04
SCP2-207ENST00000435345 POTEHQ6S545 545 aa15.28■□□□□ 0.04
SCP2-207ENST00000435345 PRR29P0C7W0 189 aa15.26■□□□□ 0.03
SCP2-207ENST00000435345 ZCCHC6Q5VYS8 1495 aaKnown RBP15.2■□□□□ 0.02
SCP2-207ENST00000435345 DCAF1Q9Y4B6 1507 aa15.19■□□□□ 0.02
SCP2-207ENST00000435345 PRKAR2AP13861 404 aaKnown RBP15.14■□□□□ 0.01
SCP2-207ENST00000435345 ERCC6Q03468 1493 aa15.12■□□□□ 0.01
SCP2-207ENST00000435345 CHADLQ6NUI6 762 aa15.1■□□□□ 0.01
SCP2-207ENST00000435345 CREBZFQ9NS37 354 aa15.05■□□□□ -0
SCP2-207ENST00000435345 FBXO3Q9UK99 471 aa15.02■□□□□ -0
SCP2-207ENST00000435345 TRIM41Q8WV44 630 aa15□□□□□ -0.01
SCP2-207ENST00000435345 FARP1Q9Y4F1 1045 aaPredicted RBP14.93□□□□□ -0.02
SCP2-207ENST00000435345 MIER1Q8N108 512 aa14.91□□□□□ -0.02
SCP2-207ENST00000435345 MNX1P50219 401 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms