RNA–Protein interactions for RNA: ENST00000448312.2

LDHAP3-201, Transcript of lactate dehydrogenase A pseudogene 3, humanhuman

BASIC

Gene LDHAP3, Length 1,008 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHAP3-201ENST00000448312 NISCHQ9Y2I1 1504 aa21.85■■□□□ 1.09
LDHAP3-201ENST00000448312 AEBP2Q6ZN18 517 aaPredicted RBP20.3■□□□□ 0.84
LDHAP3-201ENST00000448312 CCDC180Q9P1Z9 1646 aa19.62■□□□□ 0.73
LDHAP3-201ENST00000448312 ABCC9O60706 1549 aa19.52■□□□□ 0.72
LDHAP3-201ENST00000448312 CHIC1Q5VXU3 224 aa18.97■□□□□ 0.63
LDHAP3-201ENST00000448312 RB1CC1Q8TDY2 1594 aa18.64■□□□□ 0.58
LDHAP3-201ENST00000448312 NACADO15069 1562 aa18.54■□□□□ 0.56
LDHAP3-201ENST00000448312 DCAF8L2P0C7V8 631 aa18.38■□□□□ 0.53
LDHAP3-201ENST00000448312 MYO15BQ96JP2 1530 aa18.32■□□□□ 0.52
LDHAP3-201ENST00000448312 DNAJC5BQ9UF47 199 aa18.3■□□□□ 0.52
LDHAP3-201ENST00000448312 UNC13AQ9UPW8 1703 aa18.26■□□□□ 0.51
LDHAP3-201ENST00000448312 PABPN1Q86U42 306 aaKnown RBP eCLIP18.17■□□□□ 0.5
LDHAP3-201ENST00000448312 ZCCHC6Q5VYS8 1495 aaKnown RBP18.11■□□□□ 0.49
LDHAP3-201ENST00000448312 BICRAQ9NZM4 1560 aa18.09■□□□□ 0.49
LDHAP3-201ENST00000448312 DCAF1Q9Y4B6 1507 aa18.08■□□□□ 0.49
LDHAP3-201ENST00000448312 SHROOM4Q9ULL8 1493 aa17.88■□□□□ 0.45
LDHAP3-201ENST00000448312 SCRIBQ14160 1630 aa17.82■□□□□ 0.44
LDHAP3-201ENST00000448312 CC2D2AQ9P2K1 1620 aa17.67■□□□□ 0.42
LDHAP3-201ENST00000448312 EIF4G1Q04637 1599 aaKnown RBP17.64■□□□□ 0.41
LDHAP3-201ENST00000448312 CECR2Q9BXF3 1484 aa17.6■□□□□ 0.41
LDHAP3-201ENST00000448312 NCAPD3P42695 1498 aa17.11■□□□□ 0.33
LDHAP3-201ENST00000448312 SENP3Q9H4L4 574 aaPredicted RBP17.06■□□□□ 0.32
LDHAP3-201ENST00000448312 ATAD2BQ9ULI0 1458 aa17.05■□□□□ 0.32
LDHAP3-201ENST00000448312 SMARCA4P51532 1647 aa17.03■□□□□ 0.32
LDHAP3-201ENST00000448312 SMARCA2P51531 1590 aa17.01■□□□□ 0.31
LDHAP3-201ENST00000448312 HMGXB3Q12766 1538 aa16.98■□□□□ 0.31
LDHAP3-201ENST00000448312 BAZ1AQ9NRL2 1556 aaPredicted RBP16.97■□□□□ 0.31
LDHAP3-201ENST00000448312 PHF23Q9BUL5 403 aaPredicted RBP16.95■□□□□ 0.3
LDHAP3-201ENST00000448312 PEG3Q9GZU2 1588 aa16.9■□□□□ 0.3
LDHAP3-201ENST00000448312 BAZ1BQ9UIG0 1483 aaKnown RBP16.86■□□□□ 0.29
LDHAP3-201ENST00000448312 ERCC6Q03468 1493 aa16.86■□□□□ 0.29
LDHAP3-201ENST00000448312 CUX2O14529 1486 aa16.85■□□□□ 0.29
LDHAP3-201ENST00000448312 MROH2BQ7Z745 1585 aa16.82■□□□□ 0.28
LDHAP3-201ENST00000448312 DNAJC5Q9H3Z4 198 aa16.81■□□□□ 0.28
LDHAP3-201ENST00000448312 NESP48681 1621 aa16.78■□□□□ 0.28
LDHAP3-201ENST00000448312 LAMC3Q9Y6N6 1575 aa16.72■□□□□ 0.27
LDHAP3-201ENST00000448312 WIZO95785 1651 aa16.63■□□□□ 0.25
LDHAP3-201ENST00000448312 THOC2Q8NI27 1593 aaKnown RBP16.63■□□□□ 0.25
LDHAP3-201ENST00000448312 PDS5BQ9NTI5 1447 aa16.61■□□□□ 0.25
LDHAP3-201ENST00000448312 KIF21AQ7Z4S6 1674 aa16.6■□□□□ 0.25
LDHAP3-201ENST00000448312 CADPSQ9ULU8 1353 aa16.58■□□□□ 0.24
LDHAP3-201ENST00000448312 RSF1Q96T23 1441 aaPredicted RBP16.5■□□□□ 0.23
LDHAP3-201ENST00000448312 MRC2Q9UBG0 1479 aa16.45■□□□□ 0.22
LDHAP3-201ENST00000448312 TOP2AP11388 1531 aaKnown RBP16.42■□□□□ 0.22
LDHAP3-201ENST00000448312 WDR62O43379 1518 aa16.41■□□□□ 0.22
LDHAP3-201ENST00000448312 CFTRP13569 1480 aa16.41■□□□□ 0.22
LDHAP3-201ENST00000448312 CEP164Q9UPV0 1460 aa16.39■□□□□ 0.21
LDHAP3-201ENST00000448312 FANCD2Q9BXW9 1451 aa16.38■□□□□ 0.21
LDHAP3-201ENST00000448312 PRDM2Q13029 1718 aa16.29■□□□□ 0.2
LDHAP3-201ENST00000448312 URB2Q14146 1524 aaKnown RBP16.24■□□□□ 0.19
LDHAP3-201ENST00000448312 CCDC88BA6NC98 1476 aa16.23■□□□□ 0.19
LDHAP3-201ENST00000448312 FOXD1Q16676 465 aa16.11■□□□□ 0.17
LDHAP3-201ENST00000448312 OSCARQ8IYS5 282 aa16.09■□□□□ 0.17
LDHAP3-201ENST00000448312 TOPBP1Q92547 1522 aa16.08■□□□□ 0.16
LDHAP3-201ENST00000448312 ABCC8Q09428 1581 aa16.08■□□□□ 0.16
LDHAP3-201ENST00000448312 IFT140Q96RY7 1462 aa16.07■□□□□ 0.16
LDHAP3-201ENST00000448312 DNMBPQ6XZF7 1577 aa16.02■□□□□ 0.16
LDHAP3-201ENST00000448312 TRIM41Q8WV44 630 aa16.02■□□□□ 0.16
LDHAP3-201ENST00000448312 ZNF608Q9ULD9 1512 aaPredicted RBP16.02■□□□□ 0.15
LDHAP3-201ENST00000448312 TARBP1Q13395 1621 aaKnown RBP15.94■□□□□ 0.14
LDHAP3-201ENST00000448312 EIF4G3O43432 1585 aaKnown RBP15.94■□□□□ 0.14
LDHAP3-201ENST00000448312 POLA1P09884 1462 aaPredicted RBP15.91■□□□□ 0.14
LDHAP3-201ENST00000448312 AQRO60306 1485 aaKnown RBP eCLIP15.88■□□□□ 0.13
LDHAP3-201ENST00000448312 RIMBP3CA6NJZ7 1639 aa15.86■□□□□ 0.13
LDHAP3-201ENST00000448312 RIMBP3BA6NNM3 1639 aa15.86■□□□□ 0.13
LDHAP3-201ENST00000448312 RIMBP3Q9UFD9 1639 aa15.86■□□□□ 0.13
LDHAP3-201ENST00000448312 CHD1O14646 1710 aa15.85■□□□□ 0.13
LDHAP3-201ENST00000448312 SOGA1O94964 1423 aa15.85■□□□□ 0.13
LDHAP3-201ENST00000448312 RAD54L2Q9Y4B4 1467 aa15.83■□□□□ 0.12
LDHAP3-201ENST00000448312 ARHGEF11O15085 1522 aa15.82■□□□□ 0.12
LDHAP3-201ENST00000448312 WDR97A6NE52 1622 aa15.81■□□□□ 0.12
LDHAP3-201ENST00000448312 FGD5Q6ZNL6 1462 aa15.81■□□□□ 0.12
LDHAP3-201ENST00000448312 CUX1P39880 1505 aa15.8■□□□□ 0.12
LDHAP3-201ENST00000448312 TDRD9Q8NDG6 1382 aaKnown RBP15.79■□□□□ 0.12
LDHAP3-201ENST00000448312 SUPT5HO00267 1087 aaKnown RBP15.76■□□□□ 0.11
LDHAP3-201ENST00000448312 FBLN2P98095 1184 aa15.76■□□□□ 0.11
LDHAP3-201ENST00000448312 SNAPC4Q5SXM2 1469 aa15.71■□□□□ 0.11
LDHAP3-201ENST00000448312 GRIN2BQ13224 1484 aa15.71■□□□□ 0.1
LDHAP3-201ENST00000448312 MAGI1Q96QZ7 1491 aaPredicted RBP15.71■□□□□ 0.1
LDHAP3-201ENST00000448312 CYB5RLQ6IPT4 315 aa15.69■□□□□ 0.1
LDHAP3-201ENST00000448312 CHMP7Q8WUX9 453 aaPredicted RBP15.67■□□□□ 0.1
LDHAP3-201ENST00000448312 PBRM1Q86U86 1689 aa15.66■□□□□ 0.1
LDHAP3-201ENST00000448312 GAPVD1Q14C86 1478 aa15.65■□□□□ 0.1
LDHAP3-201ENST00000448312 ARAP1Q96P48 1450 aa15.65■□□□□ 0.1
LDHAP3-201ENST00000448312 CLASP1Q7Z460 1538 aa15.65■□□□□ 0.1
LDHAP3-201ENST00000448312 ABCA10Q8WWZ4 1543 aa15.65■□□□□ 0.1
LDHAP3-201ENST00000448312 SYNJ1O43426 1573 aa15.65■□□□□ 0.1
LDHAP3-201ENST00000448312 SYNJ2O15056 1496 aa15.65■□□□□ 0.1
LDHAP3-201ENST00000448312 ABCA5Q8WWZ7 1642 aa15.62■□□□□ 0.09
LDHAP3-201ENST00000448312 WRNQ14191 1432 aaPredicted RBP eCLIP15.59■□□□□ 0.09
LDHAP3-201ENST00000448312 TOP2BQ02880 1626 aa15.58■□□□□ 0.09
LDHAP3-201ENST00000448312 BIVM-ERCC5R4GMW8 1640 aa15.58■□□□□ 0.09
LDHAP3-201ENST00000448312 GRIN2AQ12879 1464 aa15.5■□□□□ 0.07
LDHAP3-201ENST00000448312 ADAMTS12P58397 1594 aa15.49■□□□□ 0.07
LDHAP3-201ENST00000448312 TRHP20396 242 aaPredicted RBP15.48■□□□□ 0.07
LDHAP3-201ENST00000448312 ERICH3Q5RHP9 1530 aa15.47■□□□□ 0.07
LDHAP3-201ENST00000448312 FHAD1B1AJZ9 1412 aa15.46■□□□□ 0.07
LDHAP3-201ENST00000448312 NUP160Q12769 1436 aa15.45■□□□□ 0.06
LDHAP3-201ENST00000448312 CEP170Q5SW79 1584 aa15.43■□□□□ 0.06
LDHAP3-201ENST00000448312 SHROOM2Q13796 1616 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms