RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 NISCHQ9Y2I1 1504 aa31.5■■■□□ 2.63
TMEM258-202ENST00000535042 CCDC180Q9P1Z9 1646 aa27.81■■■□□ 2.04
TMEM258-202ENST00000535042 ABCC9O60706 1549 aa27.1■■□□□ 1.93
TMEM258-202ENST00000535042 ZCCHC6Q5VYS8 1495 aaKnown RBP26.29■■□□□ 1.8
TMEM258-202ENST00000535042 DCAF8L2P0C7V8 631 aa26.27■■□□□ 1.8
TMEM258-202ENST00000535042 NACADO15069 1562 aa26.12■■□□□ 1.77
TMEM258-202ENST00000535042 RB1CC1Q8TDY2 1594 aa26.08■■□□□ 1.77
TMEM258-202ENST00000535042 MYO15BQ96JP2 1530 aa26.05■■□□□ 1.76
TMEM258-202ENST00000535042 DCAF1Q9Y4B6 1507 aa26.04■■□□□ 1.76
TMEM258-202ENST00000535042 UNC13AQ9UPW8 1703 aa25.48■■□□□ 1.67
TMEM258-202ENST00000535042 SCRIBQ14160 1630 aa25.46■■□□□ 1.67
TMEM258-202ENST00000535042 PABPN1Q86U42 306 aaKnown RBP eCLIP25.41■■□□□ 1.66
TMEM258-202ENST00000535042 BICRAQ9NZM4 1560 aa25.35■■□□□ 1.65
TMEM258-202ENST00000535042 SHROOM4Q9ULL8 1493 aa25.09■■□□□ 1.61
TMEM258-202ENST00000535042 DNAJC5BQ9UF47 199 aa24.74■■□□□ 1.55
TMEM258-202ENST00000535042 EIF4G1Q04637 1599 aaKnown RBP24.64■■□□□ 1.54
TMEM258-202ENST00000535042 CECR2Q9BXF3 1484 aa24.58■■□□□ 1.52
TMEM258-202ENST00000535042 CC2D2AQ9P2K1 1620 aa24.47■■□□□ 1.51
TMEM258-202ENST00000535042 SMARCA4P51532 1647 aa24.36■■□□□ 1.49
TMEM258-202ENST00000535042 BAZ1AQ9NRL2 1556 aaPredicted RBP24.36■■□□□ 1.49
TMEM258-202ENST00000535042 MROH2BQ7Z745 1585 aa24.31■■□□□ 1.48
TMEM258-202ENST00000535042 ATAD2BQ9ULI0 1458 aa24.21■■□□□ 1.47
TMEM258-202ENST00000535042 NCAPD3P42695 1498 aa24.16■■□□□ 1.46
TMEM258-202ENST00000535042 SMARCA2P51531 1590 aa24.13■■□□□ 1.45
TMEM258-202ENST00000535042 RSF1Q96T23 1441 aaPredicted RBP24.13■■□□□ 1.45
TMEM258-202ENST00000535042 PEG3Q9GZU2 1588 aa24.12■■□□□ 1.45
TMEM258-202ENST00000535042 WIZO95785 1651 aa24.03■■□□□ 1.44
TMEM258-202ENST00000535042 HMGXB3Q12766 1538 aa24.01■■□□□ 1.43
TMEM258-202ENST00000535042 BAZ1BQ9UIG0 1483 aaKnown RBP24■■□□□ 1.43
TMEM258-202ENST00000535042 TOP2AP11388 1531 aaKnown RBP23.78■■□□□ 1.4
TMEM258-202ENST00000535042 SUPT5HO00267 1087 aaKnown RBP23.72■■□□□ 1.39
TMEM258-202ENST00000535042 NESP48681 1621 aa23.54■■□□□ 1.36
TMEM258-202ENST00000535042 CCDC88BA6NC98 1476 aa23.54■■□□□ 1.36
TMEM258-202ENST00000535042 CADPSQ9ULU8 1353 aa23.47■■□□□ 1.35
TMEM258-202ENST00000535042 LAMC3Q9Y6N6 1575 aa23.42■■□□□ 1.34
TMEM258-202ENST00000535042 CFTRP13569 1480 aa23.37■■□□□ 1.33
TMEM258-202ENST00000535042 PDS5BQ9NTI5 1447 aa23.28■■□□□ 1.32
TMEM258-202ENST00000535042 ERCC6Q03468 1493 aa23.28■■□□□ 1.32
TMEM258-202ENST00000535042 FANCD2Q9BXW9 1451 aa23.19■■□□□ 1.3
TMEM258-202ENST00000535042 KIF21AQ7Z4S6 1674 aa23.17■■□□□ 1.3
TMEM258-202ENST00000535042 CEP164Q9UPV0 1460 aa23.11■■□□□ 1.29
TMEM258-202ENST00000535042 PRDM2Q13029 1718 aa23.08■■□□□ 1.29
TMEM258-202ENST00000535042 THOC2Q8NI27 1593 aaKnown RBP23.06■■□□□ 1.28
TMEM258-202ENST00000535042 MRC2Q9UBG0 1479 aa23.04■■□□□ 1.28
TMEM258-202ENST00000535042 URB2Q14146 1524 aaKnown RBP22.97■■□□□ 1.27
TMEM258-202ENST00000535042 WDR62O43379 1518 aa22.95■■□□□ 1.26
TMEM258-202ENST00000535042 CUX2O14529 1486 aa22.94■■□□□ 1.26
TMEM258-202ENST00000535042 AEBP2Q6ZN18 517 aaPredicted RBP22.9■■□□□ 1.26
TMEM258-202ENST00000535042 TOPBP1Q92547 1522 aa22.85■■□□□ 1.25
TMEM258-202ENST00000535042 DNMBPQ6XZF7 1577 aa22.81■■□□□ 1.24
TMEM258-202ENST00000535042 ABCC8Q09428 1581 aa22.8■■□□□ 1.24
TMEM258-202ENST00000535042 CUX1P39880 1505 aa22.78■■□□□ 1.24
TMEM258-202ENST00000535042 WRNQ14191 1432 aaPredicted RBP eCLIP22.72■■□□□ 1.23
TMEM258-202ENST00000535042 POLA1P09884 1462 aaPredicted RBP22.67■■□□□ 1.22
TMEM258-202ENST00000535042 FGD5Q6ZNL6 1462 aa22.66■■□□□ 1.22
TMEM258-202ENST00000535042 SYNJ1O43426 1573 aa22.64■■□□□ 1.22
TMEM258-202ENST00000535042 IFT140Q96RY7 1462 aa22.63■■□□□ 1.21
TMEM258-202ENST00000535042 RAD54L2Q9Y4B4 1467 aa22.61■■□□□ 1.21
TMEM258-202ENST00000535042 TOP2BQ02880 1626 aa22.6■■□□□ 1.21
TMEM258-202ENST00000535042 SOGA1O94964 1423 aa22.6■■□□□ 1.21
TMEM258-202ENST00000535042 BIVM-ERCC5R4GMW8 1640 aa22.58■■□□□ 1.21
TMEM258-202ENST00000535042 TARBP1Q13395 1621 aaKnown RBP22.56■■□□□ 1.2
TMEM258-202ENST00000535042 ZNF608Q9ULD9 1512 aaPredicted RBP22.56■■□□□ 1.2
TMEM258-202ENST00000535042 TDRD9Q8NDG6 1382 aaKnown RBP22.47■■□□□ 1.19
TMEM258-202ENST00000535042 AQRO60306 1485 aaKnown RBP eCLIP22.46■■□□□ 1.192e-6■■■■□ 24.7
TMEM258-202ENST00000535042 ABCA10Q8WWZ4 1543 aa22.43■■□□□ 1.18
TMEM258-202ENST00000535042 EIF4G3O43432 1585 aaKnown RBP22.41■■□□□ 1.18
TMEM258-202ENST00000535042 WDR97A6NE52 1622 aa22.4■■□□□ 1.18
TMEM258-202ENST00000535042 TRIM41Q8WV44 630 aa22.36■■□□□ 1.17
TMEM258-202ENST00000535042 GAPVD1Q14C86 1478 aa22.32■■□□□ 1.16
TMEM258-202ENST00000535042 ABCA5Q8WWZ7 1642 aa22.31■■□□□ 1.16
TMEM258-202ENST00000535042 CHIC1Q5VXU3 224 aa22.3■■□□□ 1.16
TMEM258-202ENST00000535042 GRIN2BQ13224 1484 aa22.28■■□□□ 1.16
TMEM258-202ENST00000535042 SNAPC4Q5SXM2 1469 aa22.23■■□□□ 1.15
TMEM258-202ENST00000535042 KIF27Q86VH2 1401 aa22.21■■□□□ 1.15
TMEM258-202ENST00000535042 PBRM1Q86U86 1689 aa22.19■■□□□ 1.14
TMEM258-202ENST00000535042 MAGI1Q96QZ7 1491 aaPredicted RBP22.17■■□□□ 1.14
TMEM258-202ENST00000535042 RUSC2Q8N2Y8 1516 aa22.16■■□□□ 1.14
TMEM258-202ENST00000535042 ERICH3Q5RHP9 1530 aa22.14■■□□□ 1.13
TMEM258-202ENST00000535042 IGF1RP08069 1367 aa22.13■■□□□ 1.13
TMEM258-202ENST00000535042 FBLN2P98095 1184 aa22.13■■□□□ 1.13
TMEM258-202ENST00000535042 SYNJ2O15056 1496 aa22.1■■□□□ 1.13
TMEM258-202ENST00000535042 CHMP7Q8WUX9 453 aaPredicted RBP22.1■■□□□ 1.13
TMEM258-202ENST00000535042 OSCARQ8IYS5 282 aa22.08■■□□□ 1.13
TMEM258-202ENST00000535042 ADAMTS12P58397 1594 aa22.08■■□□□ 1.12
TMEM258-202ENST00000535042 FHAD1B1AJZ9 1412 aa22.07■■□□□ 1.12
TMEM258-202ENST00000535042 CHD1O14646 1710 aa22.06■■□□□ 1.12
TMEM258-202ENST00000535042 DNAJC5Q9H3Z4 198 aa22.03■■□□□ 1.12
TMEM258-202ENST00000535042 CARMIL1Q5VZK9 1371 aa21.99■■□□□ 1.11
TMEM258-202ENST00000535042 GRIN2AQ12879 1464 aa21.99■■□□□ 1.11
TMEM258-202ENST00000535042 CUL7Q14999 1698 aa21.95■■□□□ 1.1
TMEM258-202ENST00000535042 FAM9AQ8IZU1 332 aaPredicted RBP21.94■■□□□ 1.1
TMEM258-202ENST00000535042 CSRNP3Q8WYN3 585 aa21.93■■□□□ 1.1
TMEM258-202ENST00000535042 EEA1Q15075 1411 aa21.91■■□□□ 1.1
TMEM258-202ENST00000535042 NUP160Q12769 1436 aa21.9■■□□□ 1.1
TMEM258-202ENST00000535042 CEP170Q5SW79 1584 aa21.88■■□□□ 1.09
TMEM258-202ENST00000535042 CLASP1Q7Z460 1538 aa21.87■■□□□ 1.09
TMEM258-202ENST00000535042 PRXQ9BXM0 1461 aa21.87■■□□□ 1.09
TMEM258-202ENST00000535042 RAPGEF2Q9Y4G8 1499 aa21.86■■□□□ 1.09
TMEM258-202ENST00000535042 KIAA0586Q9BVV6 1533 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms