RNA–Protein interactions for RNA: ENST00000430330.6

SCP2-206, Transcript of sterol carrier protein 2, humanhuman

TSL 2 BASIC

Gene SCP2, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-206ENST00000430330 AEBP2Q6ZN18 517 aaPredicted RBP25.91■■□□□ 1.74
SCP2-206ENST00000430330 CHIC1Q5VXU3 224 aa24.9■■□□□ 1.58
SCP2-206ENST00000430330 SENP3Q9H4L4 574 aaPredicted RBP21.96■■□□□ 1.11
SCP2-206ENST00000430330 PHF23Q9BUL5 403 aaPredicted RBP21.92■■□□□ 1.1
SCP2-206ENST00000430330 FOXD1Q16676 465 aa20.49■□□□□ 0.87
SCP2-206ENST00000430330 PLPPR3Q6T4P5 718 aa20.03■□□□□ 0.8
SCP2-206ENST00000430330 PPP6R1Q9UPN7 881 aa19.49■□□□□ 0.71
SCP2-206ENST00000430330 ADRA2BP18089 450 aa19.43■□□□□ 0.7
SCP2-206ENST00000430330 PIAS4Q8N2W9 510 aaPredicted RBP19.2■□□□□ 0.66
SCP2-206ENST00000430330 MSH5O43196 834 aa18.96■□□□□ 0.63
SCP2-206ENST00000430330 POTEDQ86YR6 584 aa17.97■□□□□ 0.47
SCP2-206ENST00000430330 MAPK8IP2Q13387 824 aaPredicted RBP17.76■□□□□ 0.43
SCP2-206ENST00000430330 SCAF1Q9H7N4 1312 aaKnown RBP17.67■□□□□ 0.42
SCP2-206ENST00000430330 PPP4R3CPQ6ZMV5 832 aa17.64■□□□□ 0.41
SCP2-206ENST00000430330 DMRT2Q9Y5R5 561 aa17.49■□□□□ 0.39
SCP2-206ENST00000430330 CNKSR2Q8WXI2 1034 aa17.2■□□□□ 0.34
SCP2-206ENST00000430330 NCBP3Q53F19 620 aaKnown RBP17.02■□□□□ 0.32
SCP2-206ENST00000430330 HOXD11P31277 338 aaPredicted RBP16.99■□□□□ 0.31
SCP2-206ENST00000430330 RNF216Q9NWF9 866 aaPredicted RBP16.95■□□□□ 0.3
SCP2-206ENST00000430330 KCNA4P22459 653 aa16.85■□□□□ 0.29
SCP2-206ENST00000430330 NPM3O75607 178 aaKnown RBP16.83■□□□□ 0.28
SCP2-206ENST00000430330 DCAF8L1A6NGE4 600 aa16.79■□□□□ 0.28
SCP2-206ENST00000430330 DNAJC5BQ9UF47 199 aa16.32■□□□□ 0.2
SCP2-206ENST00000430330 RNF39Q9H2S5 420 aa16.25■□□□□ 0.19
SCP2-206ENST00000430330 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.2■□□□□ 0.188e-10■□□□□ 9.9
SCP2-206ENST00000430330 CACNB1Q02641 598 aaPredicted RBP16.1■□□□□ 0.17
SCP2-206ENST00000430330 SLC4A2P04920 1241 aa16.01■□□□□ 0.15
SCP2-206ENST00000430330 C1QBPQ07021 282 aaKnown RBP16.01■□□□□ 0.15
SCP2-206ENST00000430330 SLC4A1APQ9BWU0 796 aaKnown RBP15.94■□□□□ 0.14
SCP2-206ENST00000430330 U3KPZ7 1027 aaPredicted RBP15.9■□□□□ 0.14
SCP2-206ENST00000430330 SPINK5Q9NQ38 1064 aaPredicted RBP15.6■□□□□ 0.09
SCP2-206ENST00000430330 FOXD4L1Q9NU39 408 aa15.56■□□□□ 0.08
SCP2-206ENST00000430330 CAPN15O75808 1086 aa15.52■□□□□ 0.08
SCP2-206ENST00000430330 ZBTB22O15209 634 aa15.51■□□□□ 0.07
SCP2-206ENST00000430330 MYCNP04198 464 aaPredicted RBP15.51■□□□□ 0.07
SCP2-206ENST00000430330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.5■□□□□ 0.07
SCP2-206ENST00000430330 HNRNPUL2Q1KMD3 747 aaKnown RBP15.5■□□□□ 0.07
SCP2-206ENST00000430330 SAMD1Q6SPF0 538 aaPredicted RBP15.45■□□□□ 0.06
SCP2-206ENST00000430330 APLP2Q06481 763 aa15.39■□□□□ 0.05
SCP2-206ENST00000430330 TRHP20396 242 aaPredicted RBP15.38■□□□□ 0.05
SCP2-206ENST00000430330 DSG3P32926 999 aa15.36■□□□□ 0.05
SCP2-206ENST00000430330 ZNF219Q9P2Y4 722 aaPredicted RBP15.29■□□□□ 0.04
SCP2-206ENST00000430330 ABCB7O75027 752 aa15.22■□□□□ 0.03
SCP2-206ENST00000430330 ATF5Q9Y2D1 282 aaPredicted RBP15.22■□□□□ 0.03
SCP2-206ENST00000430330 CSRNP3Q8WYN3 585 aa15.12■□□□□ 0.01
SCP2-206ENST00000430330 EHMT2Q96KQ7 1210 aa15.11■□□□□ 0.01
SCP2-206ENST00000430330 POLA2Q14181 598 aa15.05■□□□□ -0
SCP2-206ENST00000430330 ATXN8OSP0DMR3 200 aa15.02■□□□□ -0
SCP2-206ENST00000430330 ZBTB12Q9Y330 459 aaPredicted RBP14.67□□□□□ -0.06
SCP2-206ENST00000430330 RBM42Q9BTD8 480 aaKnown RBP14.56□□□□□ -0.08
SCP2-206ENST00000430330 OSCARQ8IYS5 282 aa14.53□□□□□ -0.08
SCP2-206ENST00000430330 MKRN4PQ13434 485 aaPredicted RBP14.52□□□□□ -0.09
SCP2-206ENST00000430330 FBLN2P98095 1184 aa14.5□□□□□ -0.09
SCP2-206ENST00000430330 AKT1S1Q96B36 256 aa14.35□□□□□ -0.11
SCP2-206ENST00000430330 SPDYE2BA6NHP3 402 aa14.29□□□□□ -0.12
SCP2-206ENST00000430330 SPDYE6P0CI01 402 aa14.29□□□□□ -0.12
SCP2-206ENST00000430330 SPDYE2Q495Y8 402 aa14.29□□□□□ -0.12
SCP2-206ENST00000430330 REM2Q8IYK8 340 aaPredicted RBP14.25□□□□□ -0.13
SCP2-206ENST00000430330 ZNF692Q9BU19 519 aaPredicted RBP14.22□□□□□ -0.13
SCP2-206ENST00000430330 CHRDL2Q6WN34 429 aa14.16□□□□□ -0.14
SCP2-206ENST00000430330 SSUH2Q9Y2M2 353 aa14.15□□□□□ -0.14
SCP2-206ENST00000430330 POTEHQ6S545 545 aa14.14□□□□□ -0.15
SCP2-206ENST00000430330 PITPNM1O00562 1244 aa14.08□□□□□ -0.16
SCP2-206ENST00000430330 PABPN1Q86U42 306 aaKnown RBP eCLIP14.02□□□□□ -0.17
SCP2-206ENST00000430330 SPDYE4A6NLX3 237 aa13.98□□□□□ -0.17
SCP2-206ENST00000430330 CLEC11AQ9Y240 323 aa13.96□□□□□ -0.17
SCP2-206ENST00000430330 SPDYE1Q8NFV5 336 aaPredicted RBP13.95□□□□□ -0.18
SCP2-206ENST00000430330 PIP4P2Q8N4L2 257 aa13.92□□□□□ -0.18
SCP2-206ENST00000430330 FXR2P51116 673 aaKnown RBP eCLIP13.89□□□□□ -0.19
SCP2-206ENST00000430330 PRR29P0C7W0 189 aa13.77□□□□□ -0.21
SCP2-206ENST00000430330 PRKAR2AP13861 404 aaKnown RBP13.73□□□□□ -0.21
SCP2-206ENST00000430330 CHADLQ6NUI6 762 aa13.69□□□□□ -0.22
SCP2-206ENST00000430330 PROM2Q8N271 834 aa13.68□□□□□ -0.22
SCP2-206ENST00000430330 FKBP8Q14318 412 aa13.67□□□□□ -0.22
SCP2-206ENST00000430330 STAG3Q9UJ98 1225 aa13.66□□□□□ -0.22
SCP2-206ENST00000430330 HAX1O00165 279 aa13.57□□□□□ -0.24
SCP2-206ENST00000430330 CREBZFQ9NS37 354 aa13.53□□□□□ -0.24
SCP2-206ENST00000430330 EVX2Q03828 476 aa13.5□□□□□ -0.25
SCP2-206ENST00000430330 FARP1Q9Y4F1 1045 aaPredicted RBP13.48□□□□□ -0.25
SCP2-206ENST00000430330 C19orf67A6NJJ6 358 aa13.42□□□□□ -0.26
SCP2-206ENST00000430330 SP7Q8TDD2 431 aaPredicted RBP13.41□□□□□ -0.26
SCP2-206ENST00000430330 MNX1P50219 401 aaPredicted RBP13.35□□□□□ -0.27
SCP2-206ENST00000430330 MIER1Q8N108 512 aa13.32□□□□□ -0.28
SCP2-206ENST00000430330 CD44P16070 742 aaKnown RBP13.3□□□□□ -0.28
SCP2-206ENST00000430330 NPM1P06748 294 aaKnown RBP eCLIP13.24□□□□□ -0.29
SCP2-206ENST00000430330 PLCD3Q8N3E9 789 aa13.23□□□□□ -0.29
SCP2-206ENST00000430330 FBXO3Q9UK99 471 aa13.21□□□□□ -0.29
SCP2-206ENST00000430330 PLEKHG5O94827 1062 aa13.19□□□□□ -0.3
SCP2-206ENST00000430330 ZRANB1Q9UGI0 708 aa13.18□□□□□ -0.3
SCP2-206ENST00000430330 GABBR2O75899 941 aa13.16□□□□□ -0.3
SCP2-206ENST00000430330 ZNF579Q8NAF0 562 aaKnown RBP13.09□□□□□ -0.31
SCP2-206ENST00000430330 PAK3O75914 559 aaPredicted RBP13.08□□□□□ -0.32
SCP2-206ENST00000430330 VASPP50552 380 aaPredicted RBP13.08□□□□□ -0.32
SCP2-206ENST00000430330 TSPYL2Q9H2G4 693 aaPredicted RBP13.08□□□□□ -0.32
SCP2-206ENST00000430330 RASEFQ8IZ41 740 aa13.04□□□□□ -0.32
SCP2-206ENST00000430330 PHF12Q96QT6 1004 aa13.04□□□□□ -0.32
SCP2-206ENST00000430330 ZBTB47Q9UFB7 747 aaPredicted RBP13.04□□□□□ -0.32
SCP2-206ENST00000430330 NUBP1P53384 320 aa13.01□□□□□ -0.33
SCP2-206ENST00000430330 CLCN6P51797 869 aa12.98□□□□□ -0.33
SCP2-206ENST00000430330 CCDC61Q9Y6R9 512 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms