Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CTSDP07339 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTSDP07339 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTSDP07339 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTSDP07339 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTSDP07339 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTSDP07339 ZNRF2P2-203ENST00000454624 420 ntBASIC19.34■□□□□ 0.69
CTSDP07339 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTSDP07339 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTSDP07339 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTSDP07339 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTSDP07339 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTSDP07339 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.33■□□□□ 0.69
CTSDP07339 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTSDP07339 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.33■□□□□ 0.68
CTSDP07339 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CTSDP07339 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTSDP07339 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
CTSDP07339 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTSDP07339 C9orf163-202ENST00000624034 2573 ntBASIC19.33■□□□□ 0.68
CTSDP07339 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTSDP07339 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTSDP07339 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
CTSDP07339 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.32■□□□□ 0.68
CTSDP07339 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.32■□□□□ 0.68
CTSDP07339 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.32■□□□□ 0.68
CTSDP07339 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTSDP07339 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTSDP07339 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.31■□□□□ 0.68
CTSDP07339 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CTSDP07339 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CTSDP07339 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTSDP07339 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTSDP07339 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CTSDP07339 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CTSDP07339 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.31■□□□□ 0.68
CTSDP07339 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTSDP07339 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTSDP07339 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTSDP07339 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTSDP07339 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CTSDP07339 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CTSDP07339 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.31■□□□□ 0.68
CTSDP07339 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTSDP07339 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.3■□□□□ 0.68
CTSDP07339 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.3■□□□□ 0.68
CTSDP07339 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTSDP07339 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CTSDP07339 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTSDP07339 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTSDP07339 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTSDP07339 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CTSDP07339 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTSDP07339 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
CTSDP07339 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTSDP07339 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTSDP07339 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.29■□□□□ 0.68
CTSDP07339 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTSDP07339 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTSDP07339 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTSDP07339 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTSDP07339 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTSDP07339 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CTSDP07339 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CTSDP07339 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CTSDP07339 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.28■□□□□ 0.68
CTSDP07339 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
CTSDP07339 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTSDP07339 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CTSDP07339 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.28■□□□□ 0.68
CTSDP07339 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTSDP07339 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CTSDP07339 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTSDP07339 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.28■□□□□ 0.68
CTSDP07339 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CTSDP07339 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CTSDP07339 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CTSDP07339 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.27■□□□□ 0.68
CTSDP07339 AL117328.2-201ENST00000624617 1940 ntBASIC19.27■□□□□ 0.68
CTSDP07339 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTSDP07339 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTSDP07339 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.27■□□□□ 0.68
CTSDP07339 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CTSDP07339 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CTSDP07339 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.27■□□□□ 0.67
CTSDP07339 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.27■□□□□ 0.67
CTSDP07339 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CTSDP07339 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTSDP07339 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.26■□□□□ 0.67
CTSDP07339 AC025884.2-201ENST00000553429 711 ntBASIC19.26■□□□□ 0.67
CTSDP07339 MIR3960-201ENST00000583311 91 ntBASIC19.26■□□□□ 0.67
CTSDP07339 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTSDP07339 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTSDP07339 CLDN5-201ENST00000403084 2357 ntBASIC19.26■□□□□ 0.67
CTSDP07339 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTSDP07339 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.25■□□□□ 0.67
CTSDP07339 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSDP07339 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSDP07339 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTSDP07339 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms