Protein–RNA interactions for Protein: P04155

TFF1, Trefoil factor 1, humanhuman

Predictions only

Length 84 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1P04155 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TFF1P04155 AL139125.2-201ENST00000623134 1869 ntBASIC19.63■□□□□ 0.73
TFF1P04155 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TFF1P04155 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TFF1P04155 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
TFF1P04155 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TFF1P04155 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.63■□□□□ 0.73
TFF1P04155 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.63■□□□□ 0.73
TFF1P04155 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TFF1P04155 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TFF1P04155 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TFF1P04155 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.62■□□□□ 0.73
TFF1P04155 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.62■□□□□ 0.73
TFF1P04155 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.62■□□□□ 0.73
TFF1P04155 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TFF1P04155 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.62■□□□□ 0.73
TFF1P04155 AC103834.1-201ENST00000520383 144 ntBASIC19.62■□□□□ 0.73
TFF1P04155 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.62■□□□□ 0.73
TFF1P04155 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TFF1P04155 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TFF1P04155 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TFF1P04155 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TFF1P04155 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.61■□□□□ 0.73
TFF1P04155 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TFF1P04155 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TFF1P04155 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TFF1P04155 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.61■□□□□ 0.73
TFF1P04155 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.6■□□□□ 0.73
TFF1P04155 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TFF1P04155 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
TFF1P04155 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TFF1P04155 AL592295.1-201ENST00000400984 884 ntBASIC19.6■□□□□ 0.73
TFF1P04155 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.6■□□□□ 0.73
TFF1P04155 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.6■□□□□ 0.73
TFF1P04155 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.6■□□□□ 0.73
TFF1P04155 MIR6089-201ENST00000616698 64 ntBASIC19.6■□□□□ 0.73
TFF1P04155 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TFF1P04155 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.6■□□□□ 0.73
TFF1P04155 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
TFF1P04155 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TFF1P04155 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TFF1P04155 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TFF1P04155 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TFF1P04155 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TFF1P04155 LINC01124-201ENST00000409786 2117 ntBASIC19.59■□□□□ 0.73
TFF1P04155 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TFF1P04155 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.59■□□□□ 0.73
TFF1P04155 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TFF1P04155 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TFF1P04155 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TFF1P04155 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TFF1P04155 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TFF1P04155 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
TFF1P04155 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TFF1P04155 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.58■□□□□ 0.72
TFF1P04155 AP003733.4-201ENST00000623785 1697 ntBASIC19.58■□□□□ 0.72
TFF1P04155 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.58■□□□□ 0.72
TFF1P04155 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TFF1P04155 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TFF1P04155 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.57■□□□□ 0.72
TFF1P04155 AC019171.1-201ENST00000601251 1056 ntBASIC19.57■□□□□ 0.72
TFF1P04155 HLA-L-211ENST00000482052 1765 ntBASIC19.57■□□□□ 0.72
TFF1P04155 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.56■□□□□ 0.72
TFF1P04155 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.56■□□□□ 0.72
TFF1P04155 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TFF1P04155 AC074183.2-201ENST00000623112 922 ntBASIC19.56■□□□□ 0.72
TFF1P04155 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TFF1P04155 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.56■□□□□ 0.72
TFF1P04155 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TFF1P04155 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TFF1P04155 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TFF1P04155 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TFF1P04155 AC090877.2-201ENST00000558441 1738 ntBASIC19.54■□□□□ 0.72
TFF1P04155 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.54■□□□□ 0.72
TFF1P04155 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TFF1P04155 AC093323.1-202ENST00000635031 2045 ntBASIC19.54■□□□□ 0.72
TFF1P04155 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TFF1P04155 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TFF1P04155 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.54■□□□□ 0.72
TFF1P04155 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TFF1P04155 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TFF1P04155 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TFF1P04155 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TFF1P04155 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TFF1P04155 RARRES2P1-201ENST00000474487 481 ntBASIC19.53■□□□□ 0.72
TFF1P04155 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.53■□□□□ 0.72
TFF1P04155 AC120024.1-201ENST00000562672 995 ntBASIC19.53■□□□□ 0.72
TFF1P04155 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TFF1P04155 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.53■□□□□ 0.72
TFF1P04155 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.53■□□□□ 0.72
TFF1P04155 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TFF1P04155 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TFF1P04155 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TFF1P04155 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TFF1P04155 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.52■□□□□ 0.72
TFF1P04155 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TFF1P04155 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TFF1P04155 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TFF1P04155 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TFF1P04155 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms