Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 SLC6A10P-202ENST00000431994 2058 ntBASIC18.46■□□□□ 0.55
IFNA1P01562 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IFNA1P01562 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.46■□□□□ 0.55
IFNA1P01562 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
IFNA1P01562 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.46■□□□□ 0.55
IFNA1P01562 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IFNA1P01562 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IFNA1P01562 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.45■□□□□ 0.54
IFNA1P01562 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
IFNA1P01562 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
IFNA1P01562 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
IFNA1P01562 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.45■□□□□ 0.54
IFNA1P01562 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
IFNA1P01562 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
IFNA1P01562 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
IFNA1P01562 AC004812.2-201ENST00000611079 2094 ntBASIC18.45■□□□□ 0.54
IFNA1P01562 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
IFNA1P01562 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IFNA1P01562 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
IFNA1P01562 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.44■□□□□ 0.54
IFNA1P01562 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
IFNA1P01562 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.44■□□□□ 0.54
IFNA1P01562 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
IFNA1P01562 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
IFNA1P01562 C9orf163-202ENST00000624034 2573 ntBASIC18.43■□□□□ 0.54
IFNA1P01562 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
IFNA1P01562 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
IFNA1P01562 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
IFNA1P01562 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
IFNA1P01562 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
IFNA1P01562 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
IFNA1P01562 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.43■□□□□ 0.54
IFNA1P01562 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFNA1P01562 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFNA1P01562 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFNA1P01562 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFNA1P01562 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFNA1P01562 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
IFNA1P01562 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IFNA1P01562 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFNA1P01562 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
IFNA1P01562 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFNA1P01562 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFNA1P01562 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
IFNA1P01562 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
IFNA1P01562 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IFNA1P01562 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
IFNA1P01562 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
IFNA1P01562 ABCB10P4-201ENST00000566803 2184 ntBASIC18.41■□□□□ 0.54
IFNA1P01562 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
IFNA1P01562 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFNA1P01562 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
IFNA1P01562 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.4■□□□□ 0.54
IFNA1P01562 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFNA1P01562 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFNA1P01562 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.4■□□□□ 0.54
IFNA1P01562 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
IFNA1P01562 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFNA1P01562 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
IFNA1P01562 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.4■□□□□ 0.54
IFNA1P01562 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
IFNA1P01562 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.39■□□□□ 0.54
IFNA1P01562 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
IFNA1P01562 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
IFNA1P01562 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
IFNA1P01562 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.39■□□□□ 0.53
IFNA1P01562 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IFNA1P01562 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
IFNA1P01562 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.39■□□□□ 0.53
IFNA1P01562 AC233723.2-201ENST00000623798 2106 ntBASIC18.39■□□□□ 0.53
IFNA1P01562 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
IFNA1P01562 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
IFNA1P01562 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
IFNA1P01562 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
IFNA1P01562 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
IFNA1P01562 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFNA1P01562 MIR762-201ENST00000390236 83 ntBASIC18.38■□□□□ 0.53
IFNA1P01562 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
IFNA1P01562 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFNA1P01562 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
IFNA1P01562 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.38■□□□□ 0.53
IFNA1P01562 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
IFNA1P01562 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IFNA1P01562 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.37■□□□□ 0.53
IFNA1P01562 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.37■□□□□ 0.53
IFNA1P01562 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
IFNA1P01562 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IFNA1P01562 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IFNA1P01562 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
IFNA1P01562 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
IFNA1P01562 LINC00565-201ENST00000562710 2331 ntBASIC18.37■□□□□ 0.53
IFNA1P01562 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IFNA1P01562 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.36■□□□□ 0.53
IFNA1P01562 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
IFNA1P01562 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
IFNA1P01562 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
IFNA1P01562 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.36■□□□□ 0.53
IFNA1P01562 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.36■□□□□ 0.53
IFNA1P01562 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
IFNA1P01562 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms