Protein–RNA interactions for Protein: P00403

MT-CO2, Cytochrome c oxidase subunit 2, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO2P00403 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-CO2P00403 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MT-CO2P00403 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MT-CO2P00403 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-CO2P00403 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-CO2P00403 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
MT-CO2P00403 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
MT-CO2P00403 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.68■□□□□ 0.58
MT-CO2P00403 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MT-CO2P00403 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MT-CO2P00403 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-CO2P00403 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.67■□□□□ 0.58
MT-CO2P00403 AC133561.1-201ENST00000568600 2415 ntBASIC18.67■□□□□ 0.58
MT-CO2P00403 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-CO2P00403 RP9P-202ENST00000450133 1212 ntBASIC18.67■□□□□ 0.58
MT-CO2P00403 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MT-CO2P00403 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.67■□□□□ 0.58
MT-CO2P00403 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
MT-CO2P00403 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MT-CO2P00403 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.67■□□□□ 0.58
MT-CO2P00403 SLC6A10P-202ENST00000431994 2058 ntBASIC18.67■□□□□ 0.58
MT-CO2P00403 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-CO2P00403 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MT-CO2P00403 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-CO2P00403 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.66■□□□□ 0.58
MT-CO2P00403 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-CO2P00403 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.66■□□□□ 0.58
MT-CO2P00403 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MT-CO2P00403 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-CO2P00403 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-CO2P00403 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MT-CO2P00403 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MT-CO2P00403 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
MT-CO2P00403 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-CO2P00403 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-CO2P00403 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-CO2P00403 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
MT-CO2P00403 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
MT-CO2P00403 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
MT-CO2P00403 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
MT-CO2P00403 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
MT-CO2P00403 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MT-CO2P00403 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.64■□□□□ 0.57
MT-CO2P00403 AC093536.1-201ENST00000569153 554 ntBASIC18.64■□□□□ 0.57
MT-CO2P00403 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MT-CO2P00403 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
MT-CO2P00403 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
MT-CO2P00403 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.64■□□□□ 0.57
MT-CO2P00403 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MT-CO2P00403 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MT-CO2P00403 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.64■□□□□ 0.57
MT-CO2P00403 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MT-CO2P00403 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-CO2P00403 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-CO2P00403 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-CO2P00403 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
MT-CO2P00403 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-CO2P00403 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-CO2P00403 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-CO2P00403 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-CO2P00403 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MT-CO2P00403 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MT-CO2P00403 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MT-CO2P00403 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MT-CO2P00403 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.63■□□□□ 0.57
MT-CO2P00403 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
MT-CO2P00403 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
MT-CO2P00403 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-CO2P00403 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
MT-CO2P00403 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-CO2P00403 MIR4449-201ENST00000578365 66 ntBASIC18.62■□□□□ 0.57
MT-CO2P00403 MBP-237ENST00000579129 1052 ntTSL 5 BASIC18.62■□□□□ 0.57
MT-CO2P00403 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-CO2P00403 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-CO2P00403 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
MT-CO2P00403 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-CO2P00403 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.62■□□□□ 0.57
MT-CO2P00403 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-CO2P00403 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MT-CO2P00403 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-CO2P00403 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-CO2P00403 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-CO2P00403 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.61■□□□□ 0.57
MT-CO2P00403 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.61■□□□□ 0.57
MT-CO2P00403 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.61■□□□□ 0.57
MT-CO2P00403 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.61■□□□□ 0.57
MT-CO2P00403 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
MT-CO2P00403 AC007029.1-201ENST00000604183 313 ntBASIC18.61■□□□□ 0.57
MT-CO2P00403 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MT-CO2P00403 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-CO2P00403 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MT-CO2P00403 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-CO2P00403 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
MT-CO2P00403 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MT-CO2P00403 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-CO2P00403 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.6■□□□□ 0.57
MT-CO2P00403 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MT-CO2P00403 GPX1-201ENST00000419349 1106 ntBASIC18.6■□□□□ 0.57
MT-CO2P00403 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MT-CO2P00403 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms