Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
BEST1O76090 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.68■■□□□ 1.54
BEST1O76090 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.68■■□□□ 1.54
BEST1O76090 AF131216.4-201ENST00000638924 1588 ntBASIC24.67■■□□□ 1.54
BEST1O76090 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
BEST1O76090 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
BEST1O76090 Z92544.1-202ENST00000571933 1220 ntBASIC24.67■■□□□ 1.54
BEST1O76090 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
BEST1O76090 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
BEST1O76090 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
BEST1O76090 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
BEST1O76090 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
BEST1O76090 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.66■■□□□ 1.54
BEST1O76090 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
BEST1O76090 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
BEST1O76090 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
BEST1O76090 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.65■■□□□ 1.54
BEST1O76090 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.65■■□□□ 1.54
BEST1O76090 GUSBP5-201ENST00000418136 578 ntBASIC24.65■■□□□ 1.54
BEST1O76090 BX664725.1-201ENST00000438252 379 ntBASIC24.65■■□□□ 1.54
BEST1O76090 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
BEST1O76090 MIR6089-201ENST00000616698 64 ntBASIC24.65■■□□□ 1.54
BEST1O76090 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
BEST1O76090 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
BEST1O76090 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.64■■□□□ 1.54
BEST1O76090 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
BEST1O76090 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.64■■□□□ 1.54
BEST1O76090 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
BEST1O76090 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
BEST1O76090 AC021242.3-201ENST00000607598 1377 ntBASIC24.64■■□□□ 1.53
BEST1O76090 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.63■■□□□ 1.53
BEST1O76090 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
BEST1O76090 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
BEST1O76090 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
BEST1O76090 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
BEST1O76090 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.63■■□□□ 1.53
BEST1O76090 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.63■■□□□ 1.53
BEST1O76090 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
BEST1O76090 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
BEST1O76090 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
BEST1O76090 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
BEST1O76090 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
BEST1O76090 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
BEST1O76090 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
BEST1O76090 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
BEST1O76090 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
BEST1O76090 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
BEST1O76090 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.62■■□□□ 1.53
BEST1O76090 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
BEST1O76090 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
BEST1O76090 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.61■■□□□ 1.53
BEST1O76090 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.61■■□□□ 1.53
BEST1O76090 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.61■■□□□ 1.53
BEST1O76090 MIR4787-201ENST00000607364 84 ntBASIC24.61■■□□□ 1.53
BEST1O76090 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
BEST1O76090 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
BEST1O76090 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.61■■□□□ 1.53
BEST1O76090 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
BEST1O76090 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
BEST1O76090 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.6■■□□□ 1.53
BEST1O76090 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
BEST1O76090 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
BEST1O76090 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
BEST1O76090 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
BEST1O76090 MED17-227ENST00000640521 2047 ntTSL 5 BASIC24.59■■□□□ 1.53
BEST1O76090 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
BEST1O76090 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.59■■□□□ 1.53
BEST1O76090 KRT125P-201ENST00000546827 989 ntBASIC24.59■■□□□ 1.53
BEST1O76090 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.59■■□□□ 1.53
BEST1O76090 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
BEST1O76090 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
BEST1O76090 AC138932.3-201ENST00000567634 1902 ntBASIC24.59■■□□□ 1.53
BEST1O76090 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
BEST1O76090 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
BEST1O76090 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.58■■□□□ 1.53
BEST1O76090 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.58■■□□□ 1.53
BEST1O76090 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.58■■□□□ 1.53
BEST1O76090 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
BEST1O76090 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
BEST1O76090 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
BEST1O76090 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
BEST1O76090 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
BEST1O76090 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.57■■□□□ 1.52
BEST1O76090 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.57■■□□□ 1.52
BEST1O76090 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
BEST1O76090 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
BEST1O76090 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
BEST1O76090 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.56■■□□□ 1.52
BEST1O76090 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC24.56■■□□□ 1.52
BEST1O76090 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
BEST1O76090 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
BEST1O76090 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.56■■□□□ 1.52
BEST1O76090 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
BEST1O76090 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.56■■□□□ 1.52
BEST1O76090 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
BEST1O76090 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
BEST1O76090 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
BEST1O76090 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
BEST1O76090 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.55■■□□□ 1.52
BEST1O76090 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.55■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms