Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
PRKNO60260 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.77■■□□□ 1.08
PRKNO60260 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PRKNO60260 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.77■■□□□ 1.08
PRKNO60260 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.77■■□□□ 1.08
PRKNO60260 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.77■■□□□ 1.07
PRKNO60260 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.77■■□□□ 1.07
PRKNO60260 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRKNO60260 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PRKNO60260 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PRKNO60260 MIR4281-201ENST00000580852 62 ntBASIC21.76■■□□□ 1.07
PRKNO60260 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
PRKNO60260 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.76■■□□□ 1.07
PRKNO60260 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.76■■□□□ 1.07
PRKNO60260 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRKNO60260 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRKNO60260 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRKNO60260 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRKNO60260 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PRKNO60260 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
PRKNO60260 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.75■■□□□ 1.07
PRKNO60260 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.75■■□□□ 1.07
PRKNO60260 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PRKNO60260 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PRKNO60260 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.74■■□□□ 1.07
PRKNO60260 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.74■■□□□ 1.07
PRKNO60260 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
PRKNO60260 AC011551.1-201ENST00000614101 683 ntBASIC21.74■■□□□ 1.07
PRKNO60260 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.74■■□□□ 1.07
PRKNO60260 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PRKNO60260 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.74■■□□□ 1.07
PRKNO60260 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PRKNO60260 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PRKNO60260 AC138932.3-201ENST00000567634 1902 ntBASIC21.73■■□□□ 1.07
PRKNO60260 AC239859.2-201ENST00000444165 318 ntBASIC21.73■■□□□ 1.07
PRKNO60260 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.73■■□□□ 1.07
PRKNO60260 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.73■■□□□ 1.07
PRKNO60260 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.73■■□□□ 1.07
PRKNO60260 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.73■■□□□ 1.07
PRKNO60260 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PRKNO60260 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.72■■□□□ 1.07
PRKNO60260 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRKNO60260 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRKNO60260 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.72■■□□□ 1.07
PRKNO60260 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PRKNO60260 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
PRKNO60260 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRKNO60260 AC090877.2-201ENST00000558441 1738 ntBASIC21.72■■□□□ 1.07
PRKNO60260 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRKNO60260 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRKNO60260 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRKNO60260 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.71■■□□□ 1.07
PRKNO60260 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.71■■□□□ 1.07
PRKNO60260 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PRKNO60260 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PRKNO60260 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRKNO60260 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PRKNO60260 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
PRKNO60260 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRKNO60260 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.7■■□□□ 1.06
PRKNO60260 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.7■■□□□ 1.06
PRKNO60260 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRKNO60260 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.7■■□□□ 1.06
PRKNO60260 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRKNO60260 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.7■■□□□ 1.06
PRKNO60260 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.7■■□□□ 1.06
PRKNO60260 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRKNO60260 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRKNO60260 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRKNO60260 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRKNO60260 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRKNO60260 AC137630.3-201ENST00000607245 391 ntBASIC21.69■■□□□ 1.06
PRKNO60260 AC135731.1-201ENST00000569415 2548 ntBASIC21.69■■□□□ 1.06
PRKNO60260 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PRKNO60260 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRKNO60260 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRKNO60260 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PRKNO60260 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.68■■□□□ 1.06
PRKNO60260 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRKNO60260 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRKNO60260 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRKNO60260 GUSBP5-201ENST00000418136 578 ntBASIC21.67■■□□□ 1.06
PRKNO60260 Z92544.1-202ENST00000571933 1220 ntBASIC21.67■■□□□ 1.06
PRKNO60260 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRKNO60260 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRKNO60260 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PRKNO60260 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRKNO60260 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRKNO60260 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRKNO60260 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.66■■□□□ 1.06
PRKNO60260 BX664725.1-201ENST00000438252 379 ntBASIC21.66■■□□□ 1.06
PRKNO60260 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.66■■□□□ 1.06
PRKNO60260 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRKNO60260 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRKNO60260 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRKNO60260 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRKNO60260 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PRKNO60260 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.65■■□□□ 1.06
PRKNO60260 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRKNO60260 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms