Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDLIM1O00151 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PDLIM1O00151 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
PDLIM1O00151 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PDLIM1O00151 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.09■■□□□ 1.13
PDLIM1O00151 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
PDLIM1O00151 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PDLIM1O00151 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PDLIM1O00151 AC004812.2-201ENST00000611079 2094 ntBASIC22.08■■□□□ 1.13
PDLIM1O00151 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
PDLIM1O00151 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
PDLIM1O00151 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
PDLIM1O00151 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
PDLIM1O00151 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
PDLIM1O00151 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.08■■□□□ 1.12
PDLIM1O00151 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
PDLIM1O00151 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDLIM1O00151 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDLIM1O00151 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PDLIM1O00151 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
PDLIM1O00151 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.07■■□□□ 1.12
PDLIM1O00151 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDLIM1O00151 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.07■■□□□ 1.12
PDLIM1O00151 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDLIM1O00151 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.07■■□□□ 1.12
PDLIM1O00151 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
PDLIM1O00151 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDLIM1O00151 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.07■■□□□ 1.12
PDLIM1O00151 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDLIM1O00151 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDLIM1O00151 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.07■■□□□ 1.12
PDLIM1O00151 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PDLIM1O00151 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDLIM1O00151 AC141586.4-201ENST00000624558 1573 ntBASIC22.06■■□□□ 1.12
PDLIM1O00151 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDLIM1O00151 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDLIM1O00151 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDLIM1O00151 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PDLIM1O00151 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDLIM1O00151 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PDLIM1O00151 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.05■■□□□ 1.12
PDLIM1O00151 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDLIM1O00151 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
PDLIM1O00151 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PDLIM1O00151 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
PDLIM1O00151 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.04■■□□□ 1.12
PDLIM1O00151 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
PDLIM1O00151 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.04■■□□□ 1.12
PDLIM1O00151 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDLIM1O00151 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDLIM1O00151 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.04■■□□□ 1.12
PDLIM1O00151 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PDLIM1O00151 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDLIM1O00151 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDLIM1O00151 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PDLIM1O00151 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PDLIM1O00151 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PDLIM1O00151 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PDLIM1O00151 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
PDLIM1O00151 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.03■■□□□ 1.12
PDLIM1O00151 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PDLIM1O00151 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.03■■□□□ 1.12
PDLIM1O00151 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
PDLIM1O00151 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PDLIM1O00151 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PDLIM1O00151 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.03■■□□□ 1.12
PDLIM1O00151 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
PDLIM1O00151 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PDLIM1O00151 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
PDLIM1O00151 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
PDLIM1O00151 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PDLIM1O00151 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PDLIM1O00151 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PDLIM1O00151 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDLIM1O00151 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDLIM1O00151 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PDLIM1O00151 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDLIM1O00151 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDLIM1O00151 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PDLIM1O00151 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
PDLIM1O00151 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
PDLIM1O00151 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDLIM1O00151 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.01■■□□□ 1.11
PDLIM1O00151 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
PDLIM1O00151 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDLIM1O00151 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
PDLIM1O00151 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.01■■□□□ 1.11
PDLIM1O00151 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PDLIM1O00151 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PDLIM1O00151 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
PDLIM1O00151 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PDLIM1O00151 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PDLIM1O00151 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PDLIM1O00151 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PDLIM1O00151 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
PDLIM1O00151 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC22■■□□□ 1.11
PDLIM1O00151 MED25-210ENST00000612854 801 ntTSL 5 BASIC22■■□□□ 1.11
PDLIM1O00151 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22■■□□□ 1.11
PDLIM1O00151 MED25-214ENST00000622402 642 ntTSL 5 BASIC22■■□□□ 1.11
PDLIM1O00151 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms