Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.57■□□□□ 0.72
TRBV23-1A0A0A0MS06 AC022616.5-201ENST00000518796 181 ntBASIC19.57■□□□□ 0.72
TRBV23-1A0A0A0MS06 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV23-1A0A0A0MS06 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV23-1A0A0A0MS06 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV23-1A0A0A0MS06 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRBV23-1A0A0A0MS06 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.56■□□□□ 0.72
TRBV23-1A0A0A0MS06 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV23-1A0A0A0MS06 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV23-1A0A0A0MS06 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.56■□□□□ 0.72
TRBV23-1A0A0A0MS06 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV23-1A0A0A0MS06 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TRBV23-1A0A0A0MS06 AL592295.1-201ENST00000400984 884 ntBASIC19.56■□□□□ 0.72
TRBV23-1A0A0A0MS06 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.56■□□□□ 0.72
TRBV23-1A0A0A0MS06 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV23-1A0A0A0MS06 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV23-1A0A0A0MS06 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV23-1A0A0A0MS06 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV23-1A0A0A0MS06 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRBV23-1A0A0A0MS06 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV23-1A0A0A0MS06 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRBV23-1A0A0A0MS06 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV23-1A0A0A0MS06 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV23-1A0A0A0MS06 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV23-1A0A0A0MS06 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV23-1A0A0A0MS06 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV23-1A0A0A0MS06 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV23-1A0A0A0MS06 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV23-1A0A0A0MS06 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.55■□□□□ 0.72
TRBV23-1A0A0A0MS06 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV23-1A0A0A0MS06 AC010980.1-201ENST00000587192 1142 ntBASIC19.55■□□□□ 0.72
TRBV23-1A0A0A0MS06 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRBV23-1A0A0A0MS06 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV23-1A0A0A0MS06 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV23-1A0A0A0MS06 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV23-1A0A0A0MS06 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TRBV23-1A0A0A0MS06 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.54■□□□□ 0.72
TRBV23-1A0A0A0MS06 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
TRBV23-1A0A0A0MS06 FOXO3B-201ENST00000395675 1928 ntBASIC19.54■□□□□ 0.72
TRBV23-1A0A0A0MS06 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.54■□□□□ 0.72
TRBV23-1A0A0A0MS06 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.54■□□□□ 0.72
TRBV23-1A0A0A0MS06 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV23-1A0A0A0MS06 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TRBV23-1A0A0A0MS06 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.54■□□□□ 0.72
TRBV23-1A0A0A0MS06 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRBV23-1A0A0A0MS06 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV23-1A0A0A0MS06 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV23-1A0A0A0MS06 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV23-1A0A0A0MS06 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV23-1A0A0A0MS06 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.53■□□□□ 0.72
TRBV23-1A0A0A0MS06 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.53■□□□□ 0.72
TRBV23-1A0A0A0MS06 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV23-1A0A0A0MS06 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
TRBV23-1A0A0A0MS06 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRBV23-1A0A0A0MS06 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.53■□□□□ 0.72
TRBV23-1A0A0A0MS06 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV23-1A0A0A0MS06 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV23-1A0A0A0MS06 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.52■□□□□ 0.72
TRBV23-1A0A0A0MS06 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV23-1A0A0A0MS06 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.52■□□□□ 0.72
TRBV23-1A0A0A0MS06 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.72
TRBV23-1A0A0A0MS06 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.52■□□□□ 0.72
TRBV23-1A0A0A0MS06 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
TRBV23-1A0A0A0MS06 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRBV23-1A0A0A0MS06 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
TRBV23-1A0A0A0MS06 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV23-1A0A0A0MS06 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV23-1A0A0A0MS06 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TRBV23-1A0A0A0MS06 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.51■□□□□ 0.71
TRBV23-1A0A0A0MS06 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV23-1A0A0A0MS06 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRBV23-1A0A0A0MS06 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV23-1A0A0A0MS06 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV23-1A0A0A0MS06 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV23-1A0A0A0MS06 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV23-1A0A0A0MS06 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.5■□□□□ 0.71
TRBV23-1A0A0A0MS06 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV23-1A0A0A0MS06 MIR4508-201ENST00000584178 70 ntBASIC19.5■□□□□ 0.71
TRBV23-1A0A0A0MS06 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV23-1A0A0A0MS06 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRBV23-1A0A0A0MS06 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV23-1A0A0A0MS06 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.49■□□□□ 0.71
TRBV23-1A0A0A0MS06 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV23-1A0A0A0MS06 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
TRBV23-1A0A0A0MS06 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV23-1A0A0A0MS06 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV23-1A0A0A0MS06 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.49■□□□□ 0.71
TRBV23-1A0A0A0MS06 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.49■□□□□ 0.71
TRBV23-1A0A0A0MS06 PVT1_1.1-201ENST00000615125 194 ntBASIC19.49■□□□□ 0.71
TRBV23-1A0A0A0MS06 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV23-1A0A0A0MS06 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV23-1A0A0A0MS06 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRBV23-1A0A0A0MS06 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV23-1A0A0A0MS06 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV23-1A0A0A0MS06 YBX1P4-201ENST00000392794 808 ntBASIC19.48■□□□□ 0.71
TRBV23-1A0A0A0MS06 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV23-1A0A0A0MS06 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRBV23-1A0A0A0MS06 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV23-1A0A0A0MS06 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRBV23-1A0A0A0MS06 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms