Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
FNDC3AQ9Y2H6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.88■■□□□ 1.41
FNDC3AQ9Y2H6 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.88■■□□□ 1.41
FNDC3AQ9Y2H6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
FNDC3AQ9Y2H6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
FNDC3AQ9Y2H6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.88■■□□□ 1.41
FNDC3AQ9Y2H6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.88■■□□□ 1.41
FNDC3AQ9Y2H6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.88■■□□□ 1.41
FNDC3AQ9Y2H6 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
FNDC3AQ9Y2H6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.88■■□□□ 1.41
FNDC3AQ9Y2H6 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
FNDC3AQ9Y2H6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
FNDC3AQ9Y2H6 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
FNDC3AQ9Y2H6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
FNDC3AQ9Y2H6 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
FNDC3AQ9Y2H6 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
FNDC3AQ9Y2H6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
FNDC3AQ9Y2H6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
FNDC3AQ9Y2H6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
FNDC3AQ9Y2H6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
FNDC3AQ9Y2H6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
FNDC3AQ9Y2H6 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
FNDC3AQ9Y2H6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
FNDC3AQ9Y2H6 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.85■■□□□ 1.41
FNDC3AQ9Y2H6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
FNDC3AQ9Y2H6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
FNDC3AQ9Y2H6 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
FNDC3AQ9Y2H6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.84■■□□□ 1.41
FNDC3AQ9Y2H6 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
FNDC3AQ9Y2H6 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
FNDC3AQ9Y2H6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
FNDC3AQ9Y2H6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.84■■□□□ 1.41
FNDC3AQ9Y2H6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
FNDC3AQ9Y2H6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
FNDC3AQ9Y2H6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
FNDC3AQ9Y2H6 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
FNDC3AQ9Y2H6 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
FNDC3AQ9Y2H6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
FNDC3AQ9Y2H6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
FNDC3AQ9Y2H6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
FNDC3AQ9Y2H6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
FNDC3AQ9Y2H6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
FNDC3AQ9Y2H6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
FNDC3AQ9Y2H6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FNDC3AQ9Y2H6 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.82■■□□□ 1.4
FNDC3AQ9Y2H6 AC097639.1-201ENST00000565519 1891 ntBASIC23.82■■□□□ 1.4
FNDC3AQ9Y2H6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
FNDC3AQ9Y2H6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
FNDC3AQ9Y2H6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.82■■□□□ 1.4
FNDC3AQ9Y2H6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.82■■□□□ 1.4
FNDC3AQ9Y2H6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.82■■□□□ 1.4
FNDC3AQ9Y2H6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.82■■□□□ 1.4
FNDC3AQ9Y2H6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.82■■□□□ 1.4
FNDC3AQ9Y2H6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
FNDC3AQ9Y2H6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.82■■□□□ 1.4
FNDC3AQ9Y2H6 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.82■■□□□ 1.4
FNDC3AQ9Y2H6 AC008406.3-201ENST00000620001 1374 ntBASIC23.81■■□□□ 1.4
FNDC3AQ9Y2H6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
FNDC3AQ9Y2H6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
FNDC3AQ9Y2H6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
FNDC3AQ9Y2H6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
FNDC3AQ9Y2H6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
FNDC3AQ9Y2H6 KRT125P-201ENST00000546827 989 ntBASIC23.8■■□□□ 1.4
FNDC3AQ9Y2H6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
FNDC3AQ9Y2H6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
FNDC3AQ9Y2H6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC23.8■■□□□ 1.4
FNDC3AQ9Y2H6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
FNDC3AQ9Y2H6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
FNDC3AQ9Y2H6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.79■■□□□ 1.4
FNDC3AQ9Y2H6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.79■■□□□ 1.4
FNDC3AQ9Y2H6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
FNDC3AQ9Y2H6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FNDC3AQ9Y2H6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FNDC3AQ9Y2H6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
FNDC3AQ9Y2H6 AC020928.2-201ENST00000588717 2197 ntBASIC23.78■■□□□ 1.4
FNDC3AQ9Y2H6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
FNDC3AQ9Y2H6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.78■■□□□ 1.4
FNDC3AQ9Y2H6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
FNDC3AQ9Y2H6 MIR4787-201ENST00000607364 84 ntBASIC23.78■■□□□ 1.4
FNDC3AQ9Y2H6 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
FNDC3AQ9Y2H6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FNDC3AQ9Y2H6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FNDC3AQ9Y2H6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
FNDC3AQ9Y2H6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FNDC3AQ9Y2H6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
FNDC3AQ9Y2H6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
FNDC3AQ9Y2H6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.39
FNDC3AQ9Y2H6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
FNDC3AQ9Y2H6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
FNDC3AQ9Y2H6 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
FNDC3AQ9Y2H6 BX664725.1-201ENST00000438252 379 ntBASIC23.76■■□□□ 1.39
FNDC3AQ9Y2H6 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.76■■□□□ 1.39
FNDC3AQ9Y2H6 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
FNDC3AQ9Y2H6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
FNDC3AQ9Y2H6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
FNDC3AQ9Y2H6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
FNDC3AQ9Y2H6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
FNDC3AQ9Y2H6 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
FNDC3AQ9Y2H6 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
FNDC3AQ9Y2H6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms