Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH20Q9HBT6 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH20Q9HBT6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH20Q9HBT6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
CDH20Q9HBT6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CDH20Q9HBT6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDH20Q9HBT6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH20Q9HBT6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
CDH20Q9HBT6 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH20Q9HBT6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH20Q9HBT6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.42■□□□□ 0.86
CDH20Q9HBT6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.42■□□□□ 0.86
CDH20Q9HBT6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.42■□□□□ 0.86
CDH20Q9HBT6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.42■□□□□ 0.86
CDH20Q9HBT6 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH20Q9HBT6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH20Q9HBT6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.42■□□□□ 0.86
CDH20Q9HBT6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH20Q9HBT6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH20Q9HBT6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH20Q9HBT6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CDH20Q9HBT6 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH20Q9HBT6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDH20Q9HBT6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH20Q9HBT6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CDH20Q9HBT6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH20Q9HBT6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH20Q9HBT6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH20Q9HBT6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDH20Q9HBT6 SLC6A10P-202ENST00000431994 2058 ntBASIC20.4■□□□□ 0.86
CDH20Q9HBT6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH20Q9HBT6 MIR4508-201ENST00000584178 70 ntBASIC20.4■□□□□ 0.86
CDH20Q9HBT6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDH20Q9HBT6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH20Q9HBT6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDH20Q9HBT6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.39■□□□□ 0.86
CDH20Q9HBT6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CDH20Q9HBT6 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDH20Q9HBT6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH20Q9HBT6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH20Q9HBT6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CDH20Q9HBT6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.39■□□□□ 0.85
CDH20Q9HBT6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH20Q9HBT6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH20Q9HBT6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDH20Q9HBT6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDH20Q9HBT6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH20Q9HBT6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.38■□□□□ 0.85
CDH20Q9HBT6 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CDH20Q9HBT6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CDH20Q9HBT6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH20Q9HBT6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CDH20Q9HBT6 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH20Q9HBT6 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH20Q9HBT6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CDH20Q9HBT6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH20Q9HBT6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CDH20Q9HBT6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH20Q9HBT6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.37■□□□□ 0.85
CDH20Q9HBT6 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH20Q9HBT6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.37■□□□□ 0.85
CDH20Q9HBT6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDH20Q9HBT6 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CDH20Q9HBT6 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH20Q9HBT6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH20Q9HBT6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH20Q9HBT6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH20Q9HBT6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDH20Q9HBT6 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.36■□□□□ 0.85
CDH20Q9HBT6 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDH20Q9HBT6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.36■□□□□ 0.85
CDH20Q9HBT6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDH20Q9HBT6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.36■□□□□ 0.85
CDH20Q9HBT6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDH20Q9HBT6 AC020928.2-201ENST00000588717 2197 ntBASIC20.35■□□□□ 0.85
CDH20Q9HBT6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDH20Q9HBT6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH20Q9HBT6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.35■□□□□ 0.85
CDH20Q9HBT6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.35■□□□□ 0.85
CDH20Q9HBT6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH20Q9HBT6 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH20Q9HBT6 RARRES2P1-201ENST00000474487 481 ntBASIC20.35■□□□□ 0.85
CDH20Q9HBT6 AC103834.1-201ENST00000520383 144 ntBASIC20.35■□□□□ 0.85
CDH20Q9HBT6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
CDH20Q9HBT6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CDH20Q9HBT6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH20Q9HBT6 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDH20Q9HBT6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CDH20Q9HBT6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH20Q9HBT6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH20Q9HBT6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH20Q9HBT6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH20Q9HBT6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH20Q9HBT6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.34■□□□□ 0.85
CDH20Q9HBT6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDH20Q9HBT6 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDH20Q9HBT6 THA1P-201ENST00000590384 1145 ntBASIC20.34■□□□□ 0.85
CDH20Q9HBT6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.34■□□□□ 0.85
CDH20Q9HBT6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.34■□□□□ 0.85
CDH20Q9HBT6 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms