Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SIMC1Q8NDZ2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SIMC1Q8NDZ2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SIMC1Q8NDZ2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.05■■□□□ 1.12
SIMC1Q8NDZ2 KRT18P10-201ENST00000388836 1287 ntBASIC22.05■■□□□ 1.12
SIMC1Q8NDZ2 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC22.05■■□□□ 1.12
SIMC1Q8NDZ2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SIMC1Q8NDZ2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SIMC1Q8NDZ2 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SIMC1Q8NDZ2 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
SIMC1Q8NDZ2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SIMC1Q8NDZ2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SIMC1Q8NDZ2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SIMC1Q8NDZ2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SIMC1Q8NDZ2 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SIMC1Q8NDZ2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SIMC1Q8NDZ2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SIMC1Q8NDZ2 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SIMC1Q8NDZ2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
SIMC1Q8NDZ2 AC142381.3-201ENST00000568208 1670 ntBASIC22.04■■□□□ 1.12
SIMC1Q8NDZ2 FOXO3B-201ENST00000395675 1928 ntBASIC22.04■■□□□ 1.12
SIMC1Q8NDZ2 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SIMC1Q8NDZ2 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SIMC1Q8NDZ2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SIMC1Q8NDZ2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.03■■□□□ 1.12
SIMC1Q8NDZ2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SIMC1Q8NDZ2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.03■■□□□ 1.12
SIMC1Q8NDZ2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SIMC1Q8NDZ2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.02■■□□□ 1.12
SIMC1Q8NDZ2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SIMC1Q8NDZ2 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SIMC1Q8NDZ2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SIMC1Q8NDZ2 PVT1_1.1-201ENST00000615125 194 ntBASIC22.02■■□□□ 1.12
SIMC1Q8NDZ2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
SIMC1Q8NDZ2 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SIMC1Q8NDZ2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.02■■□□□ 1.12
SIMC1Q8NDZ2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SIMC1Q8NDZ2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
SIMC1Q8NDZ2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.02■■□□□ 1.11
SIMC1Q8NDZ2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
SIMC1Q8NDZ2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SIMC1Q8NDZ2 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
SIMC1Q8NDZ2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.01■■□□□ 1.11
SIMC1Q8NDZ2 LONRF2P2-201ENST00000439212 571 ntBASIC22.01■■□□□ 1.11
SIMC1Q8NDZ2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.01■■□□□ 1.11
SIMC1Q8NDZ2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SIMC1Q8NDZ2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.01■■□□□ 1.11
SIMC1Q8NDZ2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.01■■□□□ 1.11
SIMC1Q8NDZ2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.01■■□□□ 1.11
SIMC1Q8NDZ2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SIMC1Q8NDZ2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SIMC1Q8NDZ2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SIMC1Q8NDZ2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22■■□□□ 1.11
SIMC1Q8NDZ2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22■■□□□ 1.11
SIMC1Q8NDZ2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
SIMC1Q8NDZ2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SIMC1Q8NDZ2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22■■□□□ 1.11
SIMC1Q8NDZ2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SIMC1Q8NDZ2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SIMC1Q8NDZ2 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SIMC1Q8NDZ2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.99■■□□□ 1.11
SIMC1Q8NDZ2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
SIMC1Q8NDZ2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SIMC1Q8NDZ2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.99■■□□□ 1.11
SIMC1Q8NDZ2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.99■■□□□ 1.11
SIMC1Q8NDZ2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.99■■□□□ 1.11
SIMC1Q8NDZ2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SIMC1Q8NDZ2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SIMC1Q8NDZ2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SIMC1Q8NDZ2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SIMC1Q8NDZ2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.98■■□□□ 1.11
SIMC1Q8NDZ2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SIMC1Q8NDZ2 AC139795.1-202ENST00000500444 432 ntBASIC21.98■■□□□ 1.11
SIMC1Q8NDZ2 AC010980.1-201ENST00000587192 1142 ntBASIC21.98■■□□□ 1.11
SIMC1Q8NDZ2 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SIMC1Q8NDZ2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SIMC1Q8NDZ2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
SIMC1Q8NDZ2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SIMC1Q8NDZ2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.97■■□□□ 1.11
SIMC1Q8NDZ2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
SIMC1Q8NDZ2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SIMC1Q8NDZ2 BHLHE23-202ENST00000612929 1109 ntBASIC21.97■■□□□ 1.11
SIMC1Q8NDZ2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SIMC1Q8NDZ2 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SIMC1Q8NDZ2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.97■■□□□ 1.11
SIMC1Q8NDZ2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.97■■□□□ 1.11
SIMC1Q8NDZ2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
SIMC1Q8NDZ2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SIMC1Q8NDZ2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SIMC1Q8NDZ2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
SIMC1Q8NDZ2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SIMC1Q8NDZ2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SIMC1Q8NDZ2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.96■■□□□ 1.11
SIMC1Q8NDZ2 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SIMC1Q8NDZ2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SIMC1Q8NDZ2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SIMC1Q8NDZ2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.96■■□□□ 1.11
SIMC1Q8NDZ2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.96■■□□□ 1.11
SIMC1Q8NDZ2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SIMC1Q8NDZ2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms