Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 AF213884.3-201ENST00000563833 479 ntBASIC35.5■■■■□ 3.27
ABCA6Q8N139 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
ABCA6Q8N139 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC35.5■■■■□ 3.27
ABCA6Q8N139 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC35.49■■■■□ 3.27
ABCA6Q8N139 MIR939-201ENST00000401314 82 ntBASIC35.49■■■■□ 3.27
ABCA6Q8N139 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC35.49■■■■□ 3.27
ABCA6Q8N139 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
ABCA6Q8N139 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC35.48■■■■□ 3.27
ABCA6Q8N139 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
ABCA6Q8N139 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC35.48■■■■□ 3.27
ABCA6Q8N139 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC35.48■■■■□ 3.27
ABCA6Q8N139 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
ABCA6Q8N139 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
ABCA6Q8N139 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC35.47■■■■□ 3.27
ABCA6Q8N139 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
ABCA6Q8N139 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC35.47■■■■□ 3.27
ABCA6Q8N139 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC35.47■■■■□ 3.27
ABCA6Q8N139 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
ABCA6Q8N139 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC35.47■■■■□ 3.27
ABCA6Q8N139 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC35.46■■■■□ 3.27
ABCA6Q8N139 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
ABCA6Q8N139 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
ABCA6Q8N139 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC35.46■■■■□ 3.27
ABCA6Q8N139 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC35.46■■■■□ 3.27
ABCA6Q8N139 AP004609.3-201ENST00000610705 1884 ntBASIC35.45■■■■□ 3.27
ABCA6Q8N139 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
ABCA6Q8N139 MIR6722-201ENST00000617286 78 ntBASIC35.44■■■■□ 3.26
ABCA6Q8N139 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
ABCA6Q8N139 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
ABCA6Q8N139 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC35.43■■■■□ 3.26
ABCA6Q8N139 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
ABCA6Q8N139 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
ABCA6Q8N139 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC35.43■■■■□ 3.26
ABCA6Q8N139 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC35.43■■■■□ 3.26
ABCA6Q8N139 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
ABCA6Q8N139 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC35.43■■■■□ 3.26
ABCA6Q8N139 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC35.42■■■■□ 3.26
ABCA6Q8N139 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC35.42■■■■□ 3.26
ABCA6Q8N139 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
ABCA6Q8N139 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC35.42■■■■□ 3.26
ABCA6Q8N139 MIR6821-201ENST00000617625 74 ntBASIC35.41■■■■□ 3.26
ABCA6Q8N139 AL355001.2-201ENST00000620617 1191 ntBASIC35.41■■■■□ 3.26
ABCA6Q8N139 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
ABCA6Q8N139 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
ABCA6Q8N139 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC35.4■■■■□ 3.26
ABCA6Q8N139 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC35.4■■■■□ 3.26
ABCA6Q8N139 GRAMD4P4-201ENST00000613563 1115 ntBASIC35.39■■■■□ 3.26
ABCA6Q8N139 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC35.39■■■■□ 3.26
ABCA6Q8N139 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC35.39■■■■□ 3.26
ABCA6Q8N139 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC35.39■■■■□ 3.26
ABCA6Q8N139 AL136967.2-201ENST00000623968 743 ntBASIC35.39■■■■□ 3.26
ABCA6Q8N139 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC35.38■■■■□ 3.25
ABCA6Q8N139 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC35.38■■■■□ 3.25
ABCA6Q8N139 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC35.38■■■■□ 3.25
ABCA6Q8N139 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC35.38■■■■□ 3.25
ABCA6Q8N139 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC35.38■■■■□ 3.25
ABCA6Q8N139 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
ABCA6Q8N139 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC35.37■■■■□ 3.25
ABCA6Q8N139 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
ABCA6Q8N139 SRD5A1P1-201ENST00000442297 786 ntBASIC35.37■■■■□ 3.25
ABCA6Q8N139 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC35.37■■■■□ 3.25
ABCA6Q8N139 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
ABCA6Q8N139 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC35.36■■■■□ 3.25
ABCA6Q8N139 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
ABCA6Q8N139 FOXO3B-201ENST00000395675 1928 ntBASIC35.36■■■■□ 3.25
ABCA6Q8N139 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
ABCA6Q8N139 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC35.35■■■■□ 3.25
ABCA6Q8N139 AC097381.1-201ENST00000429019 1296 ntBASIC35.35■■■■□ 3.25
ABCA6Q8N139 AC087623.3-201ENST00000607047 1098 ntBASIC35.35■■■■□ 3.25
ABCA6Q8N139 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
ABCA6Q8N139 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC35.34■■■■□ 3.25
ABCA6Q8N139 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC35.34■■■■□ 3.25
ABCA6Q8N139 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC35.34■■■■□ 3.25
ABCA6Q8N139 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC35.34■■■■□ 3.25
ABCA6Q8N139 GATM-206ENST00000558336 1522 ntTSL 2 BASIC35.33■■■■□ 3.25
ABCA6Q8N139 HYI-206ENST00000372434 1025 ntTSL 5 BASIC35.33■■■■□ 3.25
ABCA6Q8N139 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC35.33■■■■□ 3.25
ABCA6Q8N139 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC35.33■■■■□ 3.25
ABCA6Q8N139 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC35.33■■■■□ 3.25
ABCA6Q8N139 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.25
ABCA6Q8N139 AL162430.1-201ENST00000480705 870 ntBASIC35.32■■■■□ 3.25
ABCA6Q8N139 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC35.32■■■■□ 3.25
ABCA6Q8N139 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC35.32■■■■□ 3.25
ABCA6Q8N139 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC35.32■■■■□ 3.24
ABCA6Q8N139 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.24
ABCA6Q8N139 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
ABCA6Q8N139 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC35.32■■■■□ 3.24
ABCA6Q8N139 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
ABCA6Q8N139 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
ABCA6Q8N139 PLD4-205ENST00000553861 667 ntTSL 2 BASIC35.31■■■■□ 3.24
ABCA6Q8N139 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC35.31■■■■□ 3.24
ABCA6Q8N139 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC35.31■■■■□ 3.24
ABCA6Q8N139 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC35.31■■■■□ 3.24
ABCA6Q8N139 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC35.3■■■■□ 3.24
ABCA6Q8N139 SF1-220ENST00000626028 704 ntTSL 2 BASIC35.3■■■■□ 3.24
ABCA6Q8N139 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
ABCA6Q8N139 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC35.29■■■■□ 3.24
ABCA6Q8N139 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC35.29■■■■□ 3.24
ABCA6Q8N139 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
ABCA6Q8N139 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms