Protein–RNA interactions for Protein: Q8IWY4

SCUBE1, Signal peptide, CUB and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1Q8IWY4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SCUBE1Q8IWY4 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SCUBE1Q8IWY4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SCUBE1Q8IWY4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SCUBE1Q8IWY4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SCUBE1Q8IWY4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.04■■□□□ 1.28
SCUBE1Q8IWY4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SCUBE1Q8IWY4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.04■■□□□ 1.28
SCUBE1Q8IWY4 AC007029.1-201ENST00000604183 313 ntBASIC23.04■■□□□ 1.28
SCUBE1Q8IWY4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SCUBE1Q8IWY4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SCUBE1Q8IWY4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCUBE1Q8IWY4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
SCUBE1Q8IWY4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCUBE1Q8IWY4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.03■■□□□ 1.28
SCUBE1Q8IWY4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
SCUBE1Q8IWY4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SCUBE1Q8IWY4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.02■■□□□ 1.28
SCUBE1Q8IWY4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SCUBE1Q8IWY4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SCUBE1Q8IWY4 DUSP8P5-201ENST00000422884 1815 ntBASIC23.02■■□□□ 1.28
SCUBE1Q8IWY4 CLDN5-201ENST00000403084 2357 ntBASIC23.02■■□□□ 1.28
SCUBE1Q8IWY4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SCUBE1Q8IWY4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SCUBE1Q8IWY4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SCUBE1Q8IWY4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SCUBE1Q8IWY4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
SCUBE1Q8IWY4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SCUBE1Q8IWY4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SCUBE1Q8IWY4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SCUBE1Q8IWY4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SCUBE1Q8IWY4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.01■■□□□ 1.27
SCUBE1Q8IWY4 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.01■■□□□ 1.27
SCUBE1Q8IWY4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23■■□□□ 1.27
SCUBE1Q8IWY4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23■■□□□ 1.27
SCUBE1Q8IWY4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23■■□□□ 1.27
SCUBE1Q8IWY4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SCUBE1Q8IWY4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SCUBE1Q8IWY4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SCUBE1Q8IWY4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SCUBE1Q8IWY4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
SCUBE1Q8IWY4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SCUBE1Q8IWY4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SCUBE1Q8IWY4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.99■■□□□ 1.27
SCUBE1Q8IWY4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SCUBE1Q8IWY4 ABHD17AP5-201ENST00000580133 923 ntBASIC22.99■■□□□ 1.27
SCUBE1Q8IWY4 MIR3960-201ENST00000583311 91 ntBASIC22.99■■□□□ 1.27
SCUBE1Q8IWY4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SCUBE1Q8IWY4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
SCUBE1Q8IWY4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SCUBE1Q8IWY4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.99■■□□□ 1.27
SCUBE1Q8IWY4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SCUBE1Q8IWY4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SCUBE1Q8IWY4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SCUBE1Q8IWY4 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
SCUBE1Q8IWY4 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
SCUBE1Q8IWY4 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
SCUBE1Q8IWY4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SCUBE1Q8IWY4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
SCUBE1Q8IWY4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
SCUBE1Q8IWY4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SCUBE1Q8IWY4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
SCUBE1Q8IWY4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SCUBE1Q8IWY4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SCUBE1Q8IWY4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SCUBE1Q8IWY4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
SCUBE1Q8IWY4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
SCUBE1Q8IWY4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SCUBE1Q8IWY4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SCUBE1Q8IWY4 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SCUBE1Q8IWY4 RP9P-202ENST00000450133 1212 ntBASIC22.96■■□□□ 1.27
SCUBE1Q8IWY4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SCUBE1Q8IWY4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
SCUBE1Q8IWY4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SCUBE1Q8IWY4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SCUBE1Q8IWY4 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SCUBE1Q8IWY4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SCUBE1Q8IWY4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SCUBE1Q8IWY4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
SCUBE1Q8IWY4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
SCUBE1Q8IWY4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.95■■□□□ 1.26
SCUBE1Q8IWY4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.95■■□□□ 1.26
SCUBE1Q8IWY4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22.95■■□□□ 1.26
SCUBE1Q8IWY4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.95■■□□□ 1.26
SCUBE1Q8IWY4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SCUBE1Q8IWY4 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.95■■□□□ 1.26
SCUBE1Q8IWY4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SCUBE1Q8IWY4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SCUBE1Q8IWY4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
SCUBE1Q8IWY4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
SCUBE1Q8IWY4 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.94■■□□□ 1.26
SCUBE1Q8IWY4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
SCUBE1Q8IWY4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.94■■□□□ 1.26
SCUBE1Q8IWY4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SCUBE1Q8IWY4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SCUBE1Q8IWY4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22.93■■□□□ 1.26
SCUBE1Q8IWY4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.93■■□□□ 1.26
SCUBE1Q8IWY4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SCUBE1Q8IWY4 AC093536.1-201ENST00000569153 554 ntBASIC22.93■■□□□ 1.26
SCUBE1Q8IWY4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms