Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
VRK2Q86Y07 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
VRK2Q86Y07 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VRK2Q86Y07 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VRK2Q86Y07 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.68■■□□□ 1.06
VRK2Q86Y07 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.68■■□□□ 1.06
VRK2Q86Y07 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.68■■□□□ 1.06
VRK2Q86Y07 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
VRK2Q86Y07 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
VRK2Q86Y07 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VRK2Q86Y07 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VRK2Q86Y07 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
VRK2Q86Y07 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.67■■□□□ 1.06
VRK2Q86Y07 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.67■■□□□ 1.06
VRK2Q86Y07 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VRK2Q86Y07 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VRK2Q86Y07 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VRK2Q86Y07 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VRK2Q86Y07 LINC00543-201ENST00000567234 1845 ntBASIC21.66■■□□□ 1.06
VRK2Q86Y07 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
VRK2Q86Y07 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
VRK2Q86Y07 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
VRK2Q86Y07 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
VRK2Q86Y07 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
VRK2Q86Y07 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.66■■□□□ 1.06
VRK2Q86Y07 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.66■■□□□ 1.06
VRK2Q86Y07 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
VRK2Q86Y07 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
VRK2Q86Y07 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VRK2Q86Y07 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
VRK2Q86Y07 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VRK2Q86Y07 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VRK2Q86Y07 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.65■■□□□ 1.06
VRK2Q86Y07 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VRK2Q86Y07 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VRK2Q86Y07 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
VRK2Q86Y07 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VRK2Q86Y07 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
VRK2Q86Y07 AC018755.3-202ENST00000596210 929 ntBASIC21.64■■□□□ 1.05
VRK2Q86Y07 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
VRK2Q86Y07 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
VRK2Q86Y07 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
VRK2Q86Y07 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
VRK2Q86Y07 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VRK2Q86Y07 U85056.1-201ENST00000616429 682 ntBASIC21.63■■□□□ 1.05
VRK2Q86Y07 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VRK2Q86Y07 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
VRK2Q86Y07 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VRK2Q86Y07 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VRK2Q86Y07 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
VRK2Q86Y07 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VRK2Q86Y07 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
VRK2Q86Y07 RPS2P7-201ENST00000447334 885 ntBASIC21.62■■□□□ 1.05
VRK2Q86Y07 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
VRK2Q86Y07 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.62■■□□□ 1.05
VRK2Q86Y07 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
VRK2Q86Y07 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.62■■□□□ 1.05
VRK2Q86Y07 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.61■■□□□ 1.05
VRK2Q86Y07 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.61■■□□□ 1.05
VRK2Q86Y07 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VRK2Q86Y07 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.61■■□□□ 1.05
VRK2Q86Y07 DUX4L9-201ENST00000449051 1259 ntBASIC21.61■■□□□ 1.05
VRK2Q86Y07 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VRK2Q86Y07 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VRK2Q86Y07 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
VRK2Q86Y07 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
VRK2Q86Y07 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.61■■□□□ 1.05
VRK2Q86Y07 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
VRK2Q86Y07 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VRK2Q86Y07 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
VRK2Q86Y07 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.6■■□□□ 1.05
VRK2Q86Y07 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VRK2Q86Y07 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.6■■□□□ 1.05
VRK2Q86Y07 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
VRK2Q86Y07 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.6■■□□□ 1.05
VRK2Q86Y07 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VRK2Q86Y07 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VRK2Q86Y07 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VRK2Q86Y07 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
VRK2Q86Y07 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
VRK2Q86Y07 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
VRK2Q86Y07 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
VRK2Q86Y07 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VRK2Q86Y07 HLA-L-211ENST00000482052 1765 ntBASIC21.59■■□□□ 1.05
VRK2Q86Y07 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VRK2Q86Y07 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
VRK2Q86Y07 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
VRK2Q86Y07 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
VRK2Q86Y07 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.58■■□□□ 1.05
VRK2Q86Y07 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
VRK2Q86Y07 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
VRK2Q86Y07 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
VRK2Q86Y07 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
VRK2Q86Y07 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
VRK2Q86Y07 AC141586.4-201ENST00000624558 1573 ntBASIC21.58■■□□□ 1.05
VRK2Q86Y07 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
VRK2Q86Y07 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.58■■□□□ 1.05
VRK2Q86Y07 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
VRK2Q86Y07 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
VRK2Q86Y07 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms