Protein–RNA interactions for Protein: Q6P1A2

LPCAT3, Lysophospholipid acyltransferase 5, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3Q6P1A2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LPCAT3Q6P1A2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
LPCAT3Q6P1A2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
LPCAT3Q6P1A2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LPCAT3Q6P1A2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
LPCAT3Q6P1A2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
LPCAT3Q6P1A2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LPCAT3Q6P1A2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LPCAT3Q6P1A2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LPCAT3Q6P1A2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LPCAT3Q6P1A2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.69■□□□□ 0.74
LPCAT3Q6P1A2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
LPCAT3Q6P1A2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LPCAT3Q6P1A2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LPCAT3Q6P1A2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.69■□□□□ 0.74
LPCAT3Q6P1A2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
LPCAT3Q6P1A2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LPCAT3Q6P1A2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.69■□□□□ 0.74
LPCAT3Q6P1A2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LPCAT3Q6P1A2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LPCAT3Q6P1A2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LPCAT3Q6P1A2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LPCAT3Q6P1A2 SLC6A10P-202ENST00000431994 2058 ntBASIC19.68■□□□□ 0.74
LPCAT3Q6P1A2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LPCAT3Q6P1A2 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
LPCAT3Q6P1A2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LPCAT3Q6P1A2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LPCAT3Q6P1A2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LPCAT3Q6P1A2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LPCAT3Q6P1A2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
LPCAT3Q6P1A2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LPCAT3Q6P1A2 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LPCAT3Q6P1A2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LPCAT3Q6P1A2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.67■□□□□ 0.74
LPCAT3Q6P1A2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.67■□□□□ 0.74
LPCAT3Q6P1A2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.67■□□□□ 0.74
LPCAT3Q6P1A2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LPCAT3Q6P1A2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LPCAT3Q6P1A2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
LPCAT3Q6P1A2 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LPCAT3Q6P1A2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LPCAT3Q6P1A2 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.66■□□□□ 0.74
LPCAT3Q6P1A2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LPCAT3Q6P1A2 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LPCAT3Q6P1A2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LPCAT3Q6P1A2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
LPCAT3Q6P1A2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LPCAT3Q6P1A2 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.66■□□□□ 0.74
LPCAT3Q6P1A2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LPCAT3Q6P1A2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LPCAT3Q6P1A2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LPCAT3Q6P1A2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.65■□□□□ 0.74
LPCAT3Q6P1A2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LPCAT3Q6P1A2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LPCAT3Q6P1A2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LPCAT3Q6P1A2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LPCAT3Q6P1A2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.65■□□□□ 0.74
LPCAT3Q6P1A2 DUX4L11-201ENST00000611504 1267 ntBASIC19.65■□□□□ 0.74
LPCAT3Q6P1A2 DUX4L12-201ENST00000614593 1267 ntBASIC19.65■□□□□ 0.74
LPCAT3Q6P1A2 DUX4L14-201ENST00000621227 1267 ntBASIC19.65■□□□□ 0.74
LPCAT3Q6P1A2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.65■□□□□ 0.74
LPCAT3Q6P1A2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LPCAT3Q6P1A2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LPCAT3Q6P1A2 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LPCAT3Q6P1A2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.65■□□□□ 0.74
LPCAT3Q6P1A2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LPCAT3Q6P1A2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LPCAT3Q6P1A2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC19.64■□□□□ 0.73
LPCAT3Q6P1A2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LPCAT3Q6P1A2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LPCAT3Q6P1A2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LPCAT3Q6P1A2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LPCAT3Q6P1A2 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.64■□□□□ 0.73
LPCAT3Q6P1A2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
LPCAT3Q6P1A2 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LPCAT3Q6P1A2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LPCAT3Q6P1A2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LPCAT3Q6P1A2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LPCAT3Q6P1A2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.63■□□□□ 0.73
LPCAT3Q6P1A2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LPCAT3Q6P1A2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LPCAT3Q6P1A2 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.63■□□□□ 0.73
LPCAT3Q6P1A2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LPCAT3Q6P1A2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LPCAT3Q6P1A2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.63■□□□□ 0.73
LPCAT3Q6P1A2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LPCAT3Q6P1A2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LPCAT3Q6P1A2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LPCAT3Q6P1A2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
LPCAT3Q6P1A2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LPCAT3Q6P1A2 HLA-V-202ENST00000446817 847 ntBASIC19.62■□□□□ 0.73
LPCAT3Q6P1A2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
LPCAT3Q6P1A2 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LPCAT3Q6P1A2 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.62■□□□□ 0.73
LPCAT3Q6P1A2 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.62■□□□□ 0.73
LPCAT3Q6P1A2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
LPCAT3Q6P1A2 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LPCAT3Q6P1A2 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LPCAT3Q6P1A2 AC004812.2-201ENST00000611079 2094 ntBASIC19.61■□□□□ 0.73
LPCAT3Q6P1A2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms