Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.7■■□□□ 1.54
SNX30Q5VWJ9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.7■■□□□ 1.54
SNX30Q5VWJ9 AC137630.3-201ENST00000607245 391 ntBASIC24.7■■□□□ 1.54
SNX30Q5VWJ9 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SNX30Q5VWJ9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
SNX30Q5VWJ9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SNX30Q5VWJ9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SNX30Q5VWJ9 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SNX30Q5VWJ9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.69■■□□□ 1.54
SNX30Q5VWJ9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.68■■□□□ 1.54
SNX30Q5VWJ9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
SNX30Q5VWJ9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.68■■□□□ 1.54
SNX30Q5VWJ9 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SNX30Q5VWJ9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
SNX30Q5VWJ9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SNX30Q5VWJ9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.68■■□□□ 1.54
SNX30Q5VWJ9 AC239859.2-201ENST00000444165 318 ntBASIC24.68■■□□□ 1.54
SNX30Q5VWJ9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.68■■□□□ 1.54
SNX30Q5VWJ9 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.68■■□□□ 1.54
SNX30Q5VWJ9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SNX30Q5VWJ9 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.67■■□□□ 1.54
SNX30Q5VWJ9 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.67■■□□□ 1.54
SNX30Q5VWJ9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.67■■□□□ 1.54
SNX30Q5VWJ9 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
SNX30Q5VWJ9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
SNX30Q5VWJ9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SNX30Q5VWJ9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.66■■□□□ 1.54
SNX30Q5VWJ9 DUSP8P4-201ENST00000399538 1761 ntBASIC24.66■■□□□ 1.54
SNX30Q5VWJ9 AC091060.1-201ENST00000623524 1766 ntBASIC24.66■■□□□ 1.54
SNX30Q5VWJ9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SNX30Q5VWJ9 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
SNX30Q5VWJ9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
SNX30Q5VWJ9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SNX30Q5VWJ9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SNX30Q5VWJ9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
SNX30Q5VWJ9 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.65■■□□□ 1.54
SNX30Q5VWJ9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
SNX30Q5VWJ9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SNX30Q5VWJ9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SNX30Q5VWJ9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SNX30Q5VWJ9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SNX30Q5VWJ9 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SNX30Q5VWJ9 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.64■■□□□ 1.54
SNX30Q5VWJ9 BX664725.1-201ENST00000438252 379 ntBASIC24.64■■□□□ 1.54
SNX30Q5VWJ9 MIR4281-201ENST00000580852 62 ntBASIC24.64■■□□□ 1.54
SNX30Q5VWJ9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.64■■□□□ 1.54
SNX30Q5VWJ9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.64■■□□□ 1.53
SNX30Q5VWJ9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.63■■□□□ 1.53
SNX30Q5VWJ9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SNX30Q5VWJ9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.63■■□□□ 1.53
SNX30Q5VWJ9 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SNX30Q5VWJ9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.63■■□□□ 1.53
SNX30Q5VWJ9 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.62■■□□□ 1.53
SNX30Q5VWJ9 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.62■■□□□ 1.53
SNX30Q5VWJ9 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SNX30Q5VWJ9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.62■■□□□ 1.53
SNX30Q5VWJ9 AC021242.3-201ENST00000607598 1377 ntBASIC24.62■■□□□ 1.53
SNX30Q5VWJ9 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.62■■□□□ 1.53
SNX30Q5VWJ9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SNX30Q5VWJ9 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.61■■□□□ 1.53
SNX30Q5VWJ9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SNX30Q5VWJ9 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SNX30Q5VWJ9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
SNX30Q5VWJ9 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SNX30Q5VWJ9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SNX30Q5VWJ9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
SNX30Q5VWJ9 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SNX30Q5VWJ9 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SNX30Q5VWJ9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SNX30Q5VWJ9 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
SNX30Q5VWJ9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.6■■□□□ 1.53
SNX30Q5VWJ9 KRT125P-201ENST00000546827 989 ntBASIC24.6■■□□□ 1.53
SNX30Q5VWJ9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SNX30Q5VWJ9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.6■■□□□ 1.53
SNX30Q5VWJ9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SNX30Q5VWJ9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.59■■□□□ 1.53
SNX30Q5VWJ9 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
SNX30Q5VWJ9 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
SNX30Q5VWJ9 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
SNX30Q5VWJ9 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SNX30Q5VWJ9 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.59■■□□□ 1.53
SNX30Q5VWJ9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
SNX30Q5VWJ9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
SNX30Q5VWJ9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.58■■□□□ 1.53
SNX30Q5VWJ9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
SNX30Q5VWJ9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SNX30Q5VWJ9 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.58■■□□□ 1.53
SNX30Q5VWJ9 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
SNX30Q5VWJ9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SNX30Q5VWJ9 MIR4787-201ENST00000607364 84 ntBASIC24.58■■□□□ 1.53
SNX30Q5VWJ9 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SNX30Q5VWJ9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.57■■□□□ 1.52
SNX30Q5VWJ9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SNX30Q5VWJ9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.57■■□□□ 1.52
SNX30Q5VWJ9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
SNX30Q5VWJ9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
SNX30Q5VWJ9 AC145676.1-201ENST00000514988 2004 ntBASIC24.57■■□□□ 1.52
SNX30Q5VWJ9 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.57■■□□□ 1.52
SNX30Q5VWJ9 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC24.56■■□□□ 1.52
SNX30Q5VWJ9 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms