Protein–RNA interactions for Protein: P49840

GSK3A, Glycogen synthase kinase-3 alpha, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3AP49840 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
GSK3AP49840 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GSK3AP49840 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.39■□□□□ 0.85
GSK3AP49840 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
GSK3AP49840 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
GSK3AP49840 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
GSK3AP49840 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GSK3AP49840 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
GSK3AP49840 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
GSK3AP49840 AL592293.1-201ENST00000502889 1188 ntBASIC20.38■□□□□ 0.85
GSK3AP49840 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
GSK3AP49840 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GSK3AP49840 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
GSK3AP49840 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
GSK3AP49840 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
GSK3AP49840 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GSK3AP49840 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.36■□□□□ 0.85
GSK3AP49840 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.36■□□□□ 0.85
GSK3AP49840 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.36■□□□□ 0.85
GSK3AP49840 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
GSK3AP49840 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.36■□□□□ 0.85
GSK3AP49840 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GSK3AP49840 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GSK3AP49840 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
GSK3AP49840 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GSK3AP49840 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GSK3AP49840 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GSK3AP49840 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GSK3AP49840 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
GSK3AP49840 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.36■□□□□ 0.85
GSK3AP49840 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.35■□□□□ 0.85
GSK3AP49840 LINC01124-201ENST00000409786 2117 ntBASIC20.35■□□□□ 0.85
GSK3AP49840 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GSK3AP49840 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
GSK3AP49840 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
GSK3AP49840 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.35■□□□□ 0.85
GSK3AP49840 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
GSK3AP49840 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
GSK3AP49840 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.35■□□□□ 0.85
GSK3AP49840 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.34■□□□□ 0.85
GSK3AP49840 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GSK3AP49840 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.34■□□□□ 0.85
GSK3AP49840 AC018755.3-202ENST00000596210 929 ntBASIC20.34■□□□□ 0.85
GSK3AP49840 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
GSK3AP49840 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.34■□□□□ 0.85
GSK3AP49840 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
GSK3AP49840 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GSK3AP49840 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
GSK3AP49840 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
GSK3AP49840 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
GSK3AP49840 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.33■□□□□ 0.85
GSK3AP49840 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
GSK3AP49840 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
GSK3AP49840 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
GSK3AP49840 AC141586.4-201ENST00000624558 1573 ntBASIC20.33■□□□□ 0.84
GSK3AP49840 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
GSK3AP49840 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GSK3AP49840 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GSK3AP49840 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
GSK3AP49840 SPCS2P3-201ENST00000500401 656 ntBASIC20.32■□□□□ 0.84
GSK3AP49840 U85056.1-201ENST00000616429 682 ntBASIC20.32■□□□□ 0.84
GSK3AP49840 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.32■□□□□ 0.84
GSK3AP49840 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
GSK3AP49840 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GSK3AP49840 LINC00543-201ENST00000567234 1845 ntBASIC20.32■□□□□ 0.84
GSK3AP49840 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GSK3AP49840 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GSK3AP49840 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GSK3AP49840 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
GSK3AP49840 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GSK3AP49840 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GSK3AP49840 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.31■□□□□ 0.84
GSK3AP49840 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GSK3AP49840 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GSK3AP49840 AC012676.1-201ENST00000574705 1949 ntBASIC20.3■□□□□ 0.84
GSK3AP49840 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.3■□□□□ 0.84
GSK3AP49840 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GSK3AP49840 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.3■□□□□ 0.84
GSK3AP49840 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GSK3AP49840 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GSK3AP49840 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GSK3AP49840 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GSK3AP49840 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
GSK3AP49840 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.3■□□□□ 0.84
GSK3AP49840 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
GSK3AP49840 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.3■□□□□ 0.84
GSK3AP49840 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GSK3AP49840 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GSK3AP49840 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.29■□□□□ 0.84
GSK3AP49840 FOXO3B-201ENST00000395675 1928 ntBASIC20.29■□□□□ 0.84
GSK3AP49840 RPS2P7-201ENST00000447334 885 ntBASIC20.29■□□□□ 0.84
GSK3AP49840 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.29■□□□□ 0.84
GSK3AP49840 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GSK3AP49840 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.29■□□□□ 0.84
GSK3AP49840 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GSK3AP49840 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GSK3AP49840 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GSK3AP49840 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GSK3AP49840 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.28■□□□□ 0.84
GSK3AP49840 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms