Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC14.77□□□□□ -0.05
UBE2AP49459 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UBE2AP49459 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBE2AP49459 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBE2AP49459 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBE2AP49459 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBE2AP49459 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBE2AP49459 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBE2AP49459 AC097639.1-201ENST00000565519 1891 ntBASIC14.76□□□□□ -0.05
UBE2AP49459 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBE2AP49459 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
UBE2AP49459 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBE2AP49459 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBE2AP49459 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC14.76□□□□□ -0.05
UBE2AP49459 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC14.76□□□□□ -0.05
UBE2AP49459 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC14.76□□□□□ -0.05
UBE2AP49459 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBE2AP49459 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBE2AP49459 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC14.76□□□□□ -0.05
UBE2AP49459 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBE2AP49459 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBE2AP49459 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
UBE2AP49459 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBE2AP49459 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBE2AP49459 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBE2AP49459 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
UBE2AP49459 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBE2AP49459 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBE2AP49459 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBE2AP49459 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UBE2AP49459 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
UBE2AP49459 AC007029.1-201ENST00000604183 313 ntBASIC14.75□□□□□ -0.05
UBE2AP49459 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBE2AP49459 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
UBE2AP49459 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
UBE2AP49459 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
UBE2AP49459 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBE2AP49459 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
UBE2AP49459 AC138932.1-201ENST00000534164 6830 ntBASIC14.74□□□□□ -0.05
UBE2AP49459 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBE2AP49459 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC14.74□□□□□ -0.05
UBE2AP49459 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBE2AP49459 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
UBE2AP49459 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
UBE2AP49459 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
UBE2AP49459 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
UBE2AP49459 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
UBE2AP49459 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
UBE2AP49459 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBE2AP49459 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC14.73□□□□□ -0.05
UBE2AP49459 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC14.73□□□□□ -0.05
UBE2AP49459 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBE2AP49459 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC14.73□□□□□ -0.05
UBE2AP49459 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
UBE2AP49459 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBE2AP49459 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC14.73□□□□□ -0.05
UBE2AP49459 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
UBE2AP49459 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC14.73□□□□□ -0.05
UBE2AP49459 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC14.73□□□□□ -0.05
UBE2AP49459 PKM-204ENST00000449901 2526 ntTSL 2 BASIC14.73□□□□□ -0.05
UBE2AP49459 AC142381.3-201ENST00000568208 1670 ntBASIC14.73□□□□□ -0.05
UBE2AP49459 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBE2AP49459 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBE2AP49459 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
UBE2AP49459 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
UBE2AP49459 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
UBE2AP49459 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBE2AP49459 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC14.72□□□□□ -0.05
UBE2AP49459 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
UBE2AP49459 ABHD17AP3-201ENST00000503096 1137 ntBASIC14.72□□□□□ -0.05
UBE2AP49459 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBE2AP49459 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBE2AP49459 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBE2AP49459 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBE2AP49459 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
UBE2AP49459 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
UBE2AP49459 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UBE2AP49459 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBE2AP49459 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
UBE2AP49459 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
UBE2AP49459 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC14.71□□□□□ -0.05
UBE2AP49459 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
UBE2AP49459 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC14.71□□□□□ -0.05
UBE2AP49459 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
UBE2AP49459 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
UBE2AP49459 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBE2AP49459 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBE2AP49459 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBE2AP49459 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
UBE2AP49459 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC14.7□□□□□ -0.06
UBE2AP49459 HES4-204ENST00000484667 667 ntTSL 3 BASIC14.7□□□□□ -0.06
UBE2AP49459 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBE2AP49459 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBE2AP49459 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
UBE2AP49459 AC022211.4-201ENST00000625094 2161 ntBASIC14.7□□□□□ -0.06
UBE2AP49459 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
UBE2AP49459 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBE2AP49459 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
UBE2AP49459 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
UBE2AP49459 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms