Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SMC2O95347 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SMC2O95347 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.41■■□□□ 1.82
SMC2O95347 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SMC2O95347 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.4■■□□□ 1.82
SMC2O95347 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SMC2O95347 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SMC2O95347 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.4■■□□□ 1.82
SMC2O95347 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.4■■□□□ 1.82
SMC2O95347 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SMC2O95347 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SMC2O95347 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.39■■□□□ 1.82
SMC2O95347 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.39■■□□□ 1.82
SMC2O95347 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.39■■□□□ 1.82
SMC2O95347 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SMC2O95347 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
SMC2O95347 GPX1-201ENST00000419349 1106 ntBASIC26.39■■□□□ 1.82
SMC2O95347 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SMC2O95347 RAP2CP1-202ENST00000605179 643 ntBASIC26.39■■□□□ 1.82
SMC2O95347 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SMC2O95347 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SMC2O95347 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SMC2O95347 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.38■■□□□ 1.81
SMC2O95347 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SMC2O95347 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SMC2O95347 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.38■■□□□ 1.81
SMC2O95347 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SMC2O95347 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SMC2O95347 LINC00543-201ENST00000567234 1845 ntBASIC26.37■■□□□ 1.81
SMC2O95347 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC26.37■■□□□ 1.81
SMC2O95347 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SMC2O95347 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SMC2O95347 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SMC2O95347 MIR6089-201ENST00000616698 64 ntBASIC26.37■■□□□ 1.81
SMC2O95347 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SMC2O95347 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMC2O95347 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.36■■□□□ 1.81
SMC2O95347 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.36■■□□□ 1.81
SMC2O95347 KRT18P10-201ENST00000388836 1287 ntBASIC26.36■■□□□ 1.81
SMC2O95347 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMC2O95347 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SMC2O95347 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SMC2O95347 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
SMC2O95347 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SMC2O95347 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC26.35■■□□□ 1.81
SMC2O95347 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SMC2O95347 AC141586.4-201ENST00000624558 1573 ntBASIC26.35■■□□□ 1.81
SMC2O95347 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SMC2O95347 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SMC2O95347 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SMC2O95347 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.34■■□□□ 1.81
SMC2O95347 AC026202.3-201ENST00000600805 1127 ntBASIC26.34■■□□□ 1.81
SMC2O95347 CASK-201ENST00000378154 2494 ntTSL 5 BASIC26.34■■□□□ 1.81
SMC2O95347 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SMC2O95347 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SMC2O95347 AC133561.1-201ENST00000568600 2415 ntBASIC26.34■■□□□ 1.81
SMC2O95347 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SMC2O95347 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.33■■□□□ 1.81
SMC2O95347 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SMC2O95347 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
SMC2O95347 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
SMC2O95347 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.33■■□□□ 1.81
SMC2O95347 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
SMC2O95347 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.32■■□□□ 1.8
SMC2O95347 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.32■■□□□ 1.8
SMC2O95347 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMC2O95347 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SMC2O95347 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SMC2O95347 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SMC2O95347 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC26.31■■□□□ 1.8
SMC2O95347 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC26.3■■□□□ 1.8
SMC2O95347 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMC2O95347 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SMC2O95347 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SMC2O95347 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.3■■□□□ 1.8
SMC2O95347 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SMC2O95347 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.3■■□□□ 1.8
SMC2O95347 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SMC2O95347 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
SMC2O95347 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC26.29■■□□□ 1.8
SMC2O95347 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
SMC2O95347 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
SMC2O95347 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SMC2O95347 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
SMC2O95347 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMC2O95347 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMC2O95347 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMC2O95347 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SMC2O95347 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC26.28■■□□□ 1.8
SMC2O95347 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SMC2O95347 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMC2O95347 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMC2O95347 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SMC2O95347 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMC2O95347 HES4-204ENST00000484667 667 ntTSL 3 BASIC26.26■■□□□ 1.79
SMC2O95347 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
SMC2O95347 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SMC2O95347 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
SMC2O95347 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SMC2O95347 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms