Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TO15178 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TO15178 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TO15178 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.69■■□□□ 1.06
TO15178 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TO15178 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.69■■□□□ 1.06
TO15178 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TO15178 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TO15178 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.68■■□□□ 1.06
TO15178 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.68■■□□□ 1.06
TO15178 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TO15178 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.68■■□□□ 1.06
TO15178 AC142381.3-201ENST00000568208 1670 ntBASIC21.68■■□□□ 1.06
TO15178 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TO15178 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TO15178 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TO15178 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TO15178 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
TO15178 YBX1P4-201ENST00000392794 808 ntBASIC21.67■■□□□ 1.06
TO15178 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.67■■□□□ 1.06
TO15178 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.67■■□□□ 1.06
TO15178 AC011551.1-201ENST00000614101 683 ntBASIC21.67■■□□□ 1.06
TO15178 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.67■■□□□ 1.06
TO15178 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.67■■□□□ 1.06
TO15178 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TO15178 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TO15178 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.66■■□□□ 1.06
TO15178 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TO15178 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.66■■□□□ 1.06
TO15178 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.66■■□□□ 1.06
TO15178 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TO15178 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TO15178 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
TO15178 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.65■■□□□ 1.06
TO15178 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TO15178 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.65■■□□□ 1.06
TO15178 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TO15178 KRT18P24-201ENST00000344739 1156 ntBASIC21.65■■□□□ 1.06
TO15178 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TO15178 AC090877.2-201ENST00000558441 1738 ntBASIC21.65■■□□□ 1.06
TO15178 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.65■■□□□ 1.06
TO15178 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
TO15178 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.64■■□□□ 1.06
TO15178 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TO15178 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.64■■□□□ 1.05
TO15178 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.64■■□□□ 1.05
TO15178 KRT8P33-201ENST00000508125 1423 ntBASIC21.63■■□□□ 1.05
TO15178 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TO15178 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.63■■□□□ 1.05
TO15178 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.63■■□□□ 1.05
TO15178 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TO15178 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TO15178 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.63■■□□□ 1.05
TO15178 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TO15178 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.63■■□□□ 1.05
TO15178 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TO15178 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TO15178 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TO15178 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
TO15178 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.62■■□□□ 1.05
TO15178 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.62■■□□□ 1.05
TO15178 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
TO15178 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TO15178 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.62■■□□□ 1.05
TO15178 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TO15178 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TO15178 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TO15178 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TO15178 AP003733.4-201ENST00000623785 1697 ntBASIC21.61■■□□□ 1.05
TO15178 AC120024.1-201ENST00000562672 995 ntBASIC21.61■■□□□ 1.05
TO15178 AC103724.3-201ENST00000564481 992 ntBASIC21.61■■□□□ 1.05
TO15178 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.61■■□□□ 1.05
TO15178 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
TO15178 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TO15178 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TO15178 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.6■■□□□ 1.05
TO15178 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.6■■□□□ 1.05
TO15178 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TO15178 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TO15178 RARRES2P1-201ENST00000474487 481 ntBASIC21.6■■□□□ 1.05
TO15178 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.6■■□□□ 1.05
TO15178 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TO15178 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
TO15178 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.59■■□□□ 1.05
TO15178 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TO15178 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TO15178 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.59■■□□□ 1.05
TO15178 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TO15178 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TO15178 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TO15178 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.59■■□□□ 1.05
TO15178 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC21.58■■□□□ 1.05
TO15178 THA1P-201ENST00000590384 1145 ntBASIC21.58■■□□□ 1.05
TO15178 AC138932.3-201ENST00000567634 1902 ntBASIC21.57■■□□□ 1.04
TO15178 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TO15178 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TO15178 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.57■■□□□ 1.04
TO15178 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TO15178 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.57■■□□□ 1.04
TO15178 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms