Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
TCRBV3S1A0A5B6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TCRBV3S1A0A5B6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TCRBV3S1A0A5B6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
TCRBV3S1A0A5B6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TCRBV3S1A0A5B6 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
TCRBV3S1A0A5B6 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
TCRBV3S1A0A5B6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
TCRBV3S1A0A5B6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC22.04■■□□□ 1.12
TCRBV3S1A0A5B6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
TCRBV3S1A0A5B6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TCRBV3S1A0A5B6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TCRBV3S1A0A5B6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.03■■□□□ 1.12
TCRBV3S1A0A5B6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TCRBV3S1A0A5B6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
TCRBV3S1A0A5B6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TCRBV3S1A0A5B6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
TCRBV3S1A0A5B6 DUX4L29-201ENST00000425409 679 ntBASIC22.03■■□□□ 1.12
TCRBV3S1A0A5B6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TCRBV3S1A0A5B6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
TCRBV3S1A0A5B6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TCRBV3S1A0A5B6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TCRBV3S1A0A5B6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
TCRBV3S1A0A5B6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
TCRBV3S1A0A5B6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.02■■□□□ 1.12
TCRBV3S1A0A5B6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC22.02■■□□□ 1.12
TCRBV3S1A0A5B6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TCRBV3S1A0A5B6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
TCRBV3S1A0A5B6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.02■■□□□ 1.11
TCRBV3S1A0A5B6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.11
TCRBV3S1A0A5B6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.02■■□□□ 1.11
TCRBV3S1A0A5B6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
TCRBV3S1A0A5B6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TCRBV3S1A0A5B6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
TCRBV3S1A0A5B6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TCRBV3S1A0A5B6 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TCRBV3S1A0A5B6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
TCRBV3S1A0A5B6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
TCRBV3S1A0A5B6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC22■■□□□ 1.11
TCRBV3S1A0A5B6 MED25-210ENST00000612854 801 ntTSL 5 BASIC22■■□□□ 1.11
TCRBV3S1A0A5B6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC22■■□□□ 1.11
TCRBV3S1A0A5B6 MED25-214ENST00000622402 642 ntTSL 5 BASIC22■■□□□ 1.11
TCRBV3S1A0A5B6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22■■□□□ 1.11
TCRBV3S1A0A5B6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC22■■□□□ 1.11
TCRBV3S1A0A5B6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TCRBV3S1A0A5B6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.99■■□□□ 1.11
TCRBV3S1A0A5B6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
TCRBV3S1A0A5B6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TCRBV3S1A0A5B6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
TCRBV3S1A0A5B6 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TCRBV3S1A0A5B6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TCRBV3S1A0A5B6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TCRBV3S1A0A5B6 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TCRBV3S1A0A5B6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TCRBV3S1A0A5B6 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TCRBV3S1A0A5B6 HLA-L-211ENST00000482052 1765 ntBASIC21.98■■□□□ 1.11
TCRBV3S1A0A5B6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TCRBV3S1A0A5B6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.98■■□□□ 1.11
TCRBV3S1A0A5B6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.98■■□□□ 1.11
TCRBV3S1A0A5B6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TCRBV3S1A0A5B6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.97■■□□□ 1.11
TCRBV3S1A0A5B6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TCRBV3S1A0A5B6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
TCRBV3S1A0A5B6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.97■■□□□ 1.11
TCRBV3S1A0A5B6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.97■■□□□ 1.11
TCRBV3S1A0A5B6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.97■■□□□ 1.11
TCRBV3S1A0A5B6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.97■■□□□ 1.11
TCRBV3S1A0A5B6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TCRBV3S1A0A5B6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
TCRBV3S1A0A5B6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TCRBV3S1A0A5B6 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.96■■□□□ 1.11
TCRBV3S1A0A5B6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TCRBV3S1A0A5B6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
TCRBV3S1A0A5B6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TCRBV3S1A0A5B6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TCRBV3S1A0A5B6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
TCRBV3S1A0A5B6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
TCRBV3S1A0A5B6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TCRBV3S1A0A5B6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
TCRBV3S1A0A5B6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TCRBV3S1A0A5B6 AL162393.1-201ENST00000437852 946 ntBASIC21.95■■□□□ 1.1
TCRBV3S1A0A5B6 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.95■■□□□ 1.1
TCRBV3S1A0A5B6 DUX4L13-201ENST00000554103 1267 ntBASIC21.95■■□□□ 1.1
TCRBV3S1A0A5B6 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
TCRBV3S1A0A5B6 DUX4L15-201ENST00000611059 1267 ntBASIC21.95■■□□□ 1.1
TCRBV3S1A0A5B6 DUX4L23-201ENST00000615195 1269 ntBASIC21.95■■□□□ 1.1
TCRBV3S1A0A5B6 DUX4L24-201ENST00000617576 1269 ntBASIC21.95■■□□□ 1.1
TCRBV3S1A0A5B6 DUX4L22-201ENST00000618238 1269 ntBASIC21.95■■□□□ 1.1
TCRBV3S1A0A5B6 DUX4L20-201ENST00000619712 1269 ntBASIC21.95■■□□□ 1.1
TCRBV3S1A0A5B6 DUX4L21-201ENST00000622058 1269 ntBASIC21.95■■□□□ 1.1
TCRBV3S1A0A5B6 DUX4L10-201ENST00000622460 1267 ntBASIC21.95■■□□□ 1.1
TCRBV3S1A0A5B6 DUX4L25-201ENST00000624915 1269 ntBASIC21.95■■□□□ 1.1
TCRBV3S1A0A5B6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TCRBV3S1A0A5B6 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TCRBV3S1A0A5B6 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TCRBV3S1A0A5B6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TCRBV3S1A0A5B6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TCRBV3S1A0A5B6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
TCRBV3S1A0A5B6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TCRBV3S1A0A5B6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms