Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV8-4A0A0B4J246 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV8-4A0A0B4J246 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRAV8-4A0A0B4J246 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV8-4A0A0B4J246 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV8-4A0A0B4J246 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV8-4A0A0B4J246 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC16.27■□□□□ 0.2
TRAV8-4A0A0B4J246 AC022413.1-201ENST00000624602 984 ntBASIC16.27■□□□□ 0.2
TRAV8-4A0A0B4J246 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV8-4A0A0B4J246 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRAV8-4A0A0B4J246 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV8-4A0A0B4J246 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TRAV8-4A0A0B4J246 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
TRAV8-4A0A0B4J246 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV8-4A0A0B4J246 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV8-4A0A0B4J246 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV8-4A0A0B4J246 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV8-4A0A0B4J246 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV8-4A0A0B4J246 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV8-4A0A0B4J246 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV8-4A0A0B4J246 ECEL1P2-201ENST00000461596 1295 ntBASIC16.26■□□□□ 0.19
TRAV8-4A0A0B4J246 AC025884.2-201ENST00000553429 711 ntBASIC16.26■□□□□ 0.19
TRAV8-4A0A0B4J246 SRP68-213ENST00000629930 165 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV8-4A0A0B4J246 SMPD5-203ENST00000639008 1464 ntBASIC16.26■□□□□ 0.19
TRAV8-4A0A0B4J246 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV8-4A0A0B4J246 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV8-4A0A0B4J246 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV8-4A0A0B4J246 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV8-4A0A0B4J246 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV8-4A0A0B4J246 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAV8-4A0A0B4J246 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV8-4A0A0B4J246 AL157400.5-201ENST00000507624 621 ntBASIC16.25■□□□□ 0.19
TRAV8-4A0A0B4J246 MIR4449-201ENST00000578365 66 ntBASIC16.25■□□□□ 0.19
TRAV8-4A0A0B4J246 AC092296.2-201ENST00000589470 999 ntBASIC16.25■□□□□ 0.19
TRAV8-4A0A0B4J246 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAV8-4A0A0B4J246 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV8-4A0A0B4J246 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV8-4A0A0B4J246 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV8-4A0A0B4J246 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV8-4A0A0B4J246 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV8-4A0A0B4J246 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-4A0A0B4J246 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-4A0A0B4J246 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-4A0A0B4J246 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV8-4A0A0B4J246 ERN1-208ENST00000606895 2068 ntBASIC16.24■□□□□ 0.19
TRAV8-4A0A0B4J246 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRAV8-4A0A0B4J246 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-4A0A0B4J246 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRAV8-4A0A0B4J246 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TRAV8-4A0A0B4J246 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV8-4A0A0B4J246 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-4A0A0B4J246 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-4A0A0B4J246 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-4A0A0B4J246 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV8-4A0A0B4J246 CEP120-209ENST00000515110 606 ntTSL 3 BASIC16.23■□□□□ 0.19
TRAV8-4A0A0B4J246 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV8-4A0A0B4J246 MOB2-207ENST00000614710 705 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV8-4A0A0B4J246 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV8-4A0A0B4J246 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-4A0A0B4J246 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-4A0A0B4J246 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV8-4A0A0B4J246 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV8-4A0A0B4J246 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV8-4A0A0B4J246 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-4A0A0B4J246 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
TRAV8-4A0A0B4J246 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-4A0A0B4J246 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV8-4A0A0B4J246 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-4A0A0B4J246 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-4A0A0B4J246 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.22■□□□□ 0.19
TRAV8-4A0A0B4J246 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-4A0A0B4J246 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
TRAV8-4A0A0B4J246 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC16.22■□□□□ 0.19
TRAV8-4A0A0B4J246 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TRAV8-4A0A0B4J246 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-4A0A0B4J246 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-4A0A0B4J246 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-4A0A0B4J246 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-4A0A0B4J246 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV8-4A0A0B4J246 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-4A0A0B4J246 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-4A0A0B4J246 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-4A0A0B4J246 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-4A0A0B4J246 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-4A0A0B4J246 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-4A0A0B4J246 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV8-4A0A0B4J246 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-4A0A0B4J246 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-4A0A0B4J246 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-4A0A0B4J246 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
TRAV8-4A0A0B4J246 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.21■□□□□ 0.19
TRAV8-4A0A0B4J246 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-4A0A0B4J246 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV8-4A0A0B4J246 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV8-4A0A0B4J246 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
TRAV8-4A0A0B4J246 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC16.21■□□□□ 0.19
TRAV8-4A0A0B4J246 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC16.21■□□□□ 0.18
TRAV8-4A0A0B4J246 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
TRAV8-4A0A0B4J246 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV8-4A0A0B4J246 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 399.1 ms