Protein–RNA interactions for Protein: A0A087X1G2

TBC1D3K, TBC1 domain family member 3K, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3KA0A087X1G2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TBC1D3KA0A087X1G2 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TBC1D3KA0A087X1G2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
TBC1D3KA0A087X1G2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TBC1D3KA0A087X1G2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.49■■□□□ 1.35
TBC1D3KA0A087X1G2 AC010997.5-201ENST00000609182 354 ntBASIC23.49■■□□□ 1.35
TBC1D3KA0A087X1G2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TBC1D3KA0A087X1G2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TBC1D3KA0A087X1G2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TBC1D3KA0A087X1G2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.49■■□□□ 1.35
TBC1D3KA0A087X1G2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.49■■□□□ 1.35
TBC1D3KA0A087X1G2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D3KA0A087X1G2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.48■■□□□ 1.35
TBC1D3KA0A087X1G2 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D3KA0A087X1G2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.48■■□□□ 1.35
TBC1D3KA0A087X1G2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D3KA0A087X1G2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D3KA0A087X1G2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.48■■□□□ 1.35
TBC1D3KA0A087X1G2 MTDHP2-201ENST00000601468 714 ntBASIC23.48■■□□□ 1.35
TBC1D3KA0A087X1G2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.48■■□□□ 1.35
TBC1D3KA0A087X1G2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D3KA0A087X1G2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D3KA0A087X1G2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TBC1D3KA0A087X1G2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
TBC1D3KA0A087X1G2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
TBC1D3KA0A087X1G2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.47■■□□□ 1.35
TBC1D3KA0A087X1G2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.47■■□□□ 1.35
TBC1D3KA0A087X1G2 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.47■■□□□ 1.35
TBC1D3KA0A087X1G2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
TBC1D3KA0A087X1G2 AC092803.2-201ENST00000564287 1899 ntBASIC23.47■■□□□ 1.35
TBC1D3KA0A087X1G2 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TBC1D3KA0A087X1G2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TBC1D3KA0A087X1G2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TBC1D3KA0A087X1G2 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TBC1D3KA0A087X1G2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.46■■□□□ 1.35
TBC1D3KA0A087X1G2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.46■■□□□ 1.35
TBC1D3KA0A087X1G2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.46■■□□□ 1.35
TBC1D3KA0A087X1G2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.46■■□□□ 1.35
TBC1D3KA0A087X1G2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TBC1D3KA0A087X1G2 AC090877.2-201ENST00000558441 1738 ntBASIC23.46■■□□□ 1.35
TBC1D3KA0A087X1G2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.46■■□□□ 1.35
TBC1D3KA0A087X1G2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TBC1D3KA0A087X1G2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.45■■□□□ 1.34
TBC1D3KA0A087X1G2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TBC1D3KA0A087X1G2 AF131216.4-201ENST00000638924 1588 ntBASIC23.44■■□□□ 1.34
TBC1D3KA0A087X1G2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TBC1D3KA0A087X1G2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
TBC1D3KA0A087X1G2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.44■■□□□ 1.34
TBC1D3KA0A087X1G2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
TBC1D3KA0A087X1G2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
TBC1D3KA0A087X1G2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TBC1D3KA0A087X1G2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TBC1D3KA0A087X1G2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
TBC1D3KA0A087X1G2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
TBC1D3KA0A087X1G2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.43■■□□□ 1.34
TBC1D3KA0A087X1G2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.43■■□□□ 1.34
TBC1D3KA0A087X1G2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TBC1D3KA0A087X1G2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TBC1D3KA0A087X1G2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
TBC1D3KA0A087X1G2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TBC1D3KA0A087X1G2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.42■■□□□ 1.34
TBC1D3KA0A087X1G2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.42■■□□□ 1.34
TBC1D3KA0A087X1G2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TBC1D3KA0A087X1G2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
TBC1D3KA0A087X1G2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TBC1D3KA0A087X1G2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TBC1D3KA0A087X1G2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TBC1D3KA0A087X1G2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.41■■□□□ 1.34
TBC1D3KA0A087X1G2 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.41■■□□□ 1.34
TBC1D3KA0A087X1G2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.41■■□□□ 1.34
TBC1D3KA0A087X1G2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.41■■□□□ 1.34
TBC1D3KA0A087X1G2 MIR6724-1-201ENST00000616420 92 ntBASIC23.41■■□□□ 1.34
TBC1D3KA0A087X1G2 MIR6724-2-201ENST00000616483 92 ntBASIC23.41■■□□□ 1.34
TBC1D3KA0A087X1G2 MIR6724-4-201ENST00000617390 92 ntBASIC23.41■■□□□ 1.34
TBC1D3KA0A087X1G2 MIR6724-3-201ENST00000622482 92 ntBASIC23.41■■□□□ 1.34
TBC1D3KA0A087X1G2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TBC1D3KA0A087X1G2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
TBC1D3KA0A087X1G2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TBC1D3KA0A087X1G2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.41■■□□□ 1.34
TBC1D3KA0A087X1G2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TBC1D3KA0A087X1G2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.4■■□□□ 1.34
TBC1D3KA0A087X1G2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TBC1D3KA0A087X1G2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.4■■□□□ 1.34
TBC1D3KA0A087X1G2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TBC1D3KA0A087X1G2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.4■■□□□ 1.34
TBC1D3KA0A087X1G2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.4■■□□□ 1.34
TBC1D3KA0A087X1G2 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TBC1D3KA0A087X1G2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TBC1D3KA0A087X1G2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
TBC1D3KA0A087X1G2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
TBC1D3KA0A087X1G2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.39■■□□□ 1.34
TBC1D3KA0A087X1G2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TBC1D3KA0A087X1G2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TBC1D3KA0A087X1G2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.39■■□□□ 1.33
TBC1D3KA0A087X1G2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.39■■□□□ 1.33
TBC1D3KA0A087X1G2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.39■■□□□ 1.33
TBC1D3KA0A087X1G2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
TBC1D3KA0A087X1G2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TBC1D3KA0A087X1G2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
TBC1D3KA0A087X1G2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms