Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.07■■□□□ 1.12
PCDHGA9Q9Y5G4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
PCDHGA9Q9Y5G4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.07■■□□□ 1.12
PCDHGA9Q9Y5G4 TSPY9P-201ENST00000440215 945 ntBASIC22.07■■□□□ 1.12
PCDHGA9Q9Y5G4 TSPY11P-201ENST00000442607 1045 ntBASIC22.07■■□□□ 1.12
PCDHGA9Q9Y5G4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.07■■□□□ 1.12
PCDHGA9Q9Y5G4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
PCDHGA9Q9Y5G4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.07■■□□□ 1.12
PCDHGA9Q9Y5G4 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
PCDHGA9Q9Y5G4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDHGA9Q9Y5G4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDHGA9Q9Y5G4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.06■■□□□ 1.12
PCDHGA9Q9Y5G4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHGA9Q9Y5G4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHGA9Q9Y5G4 AC092028.1-203ENST00000608262 953 ntBASIC22.06■■□□□ 1.12
PCDHGA9Q9Y5G4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHGA9Q9Y5G4 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PCDHGA9Q9Y5G4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.06■■□□□ 1.12
PCDHGA9Q9Y5G4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
PCDHGA9Q9Y5G4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC22.06■■□□□ 1.12
PCDHGA9Q9Y5G4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGA9Q9Y5G4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGA9Q9Y5G4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.05■■□□□ 1.12
PCDHGA9Q9Y5G4 MIR935-201ENST00000401179 91 ntBASIC22.05■■□□□ 1.12
PCDHGA9Q9Y5G4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.05■■□□□ 1.12
PCDHGA9Q9Y5G4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.05■■□□□ 1.12
PCDHGA9Q9Y5G4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGA9Q9Y5G4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGA9Q9Y5G4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PCDHGA9Q9Y5G4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGA9Q9Y5G4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGA9Q9Y5G4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGA9Q9Y5G4 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC22.04■■□□□ 1.12
PCDHGA9Q9Y5G4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHGA9Q9Y5G4 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGA9Q9Y5G4 AC142472.1-201ENST00000612013 1741 ntBASIC22.03■■□□□ 1.12
PCDHGA9Q9Y5G4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
PCDHGA9Q9Y5G4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHGA9Q9Y5G4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC22.03■■□□□ 1.12
PCDHGA9Q9Y5G4 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC22.03■■□□□ 1.12
PCDHGA9Q9Y5G4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDHGA9Q9Y5G4 AC091060.1-201ENST00000623524 1766 ntBASIC22.02■■□□□ 1.12
PCDHGA9Q9Y5G4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDHGA9Q9Y5G4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.02■■□□□ 1.12
PCDHGA9Q9Y5G4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGA9Q9Y5G4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHGA9Q9Y5G4 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
PCDHGA9Q9Y5G4 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGA9Q9Y5G4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGA9Q9Y5G4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHGA9Q9Y5G4 MIR638-201ENST00000385237 100 ntBASIC22.01■■□□□ 1.11
PCDHGA9Q9Y5G4 MIR4281-201ENST00000580852 62 ntBASIC22.01■■□□□ 1.11
PCDHGA9Q9Y5G4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.01■■□□□ 1.11
PCDHGA9Q9Y5G4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHGA9Q9Y5G4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHGA9Q9Y5G4 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGA9Q9Y5G4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHGA9Q9Y5G4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGA9Q9Y5G4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22■■□□□ 1.11
PCDHGA9Q9Y5G4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGA9Q9Y5G4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22■■□□□ 1.11
PCDHGA9Q9Y5G4 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHGA9Q9Y5G4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGA9Q9Y5G4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
PCDHGA9Q9Y5G4 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGA9Q9Y5G4 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGA9Q9Y5G4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGA9Q9Y5G4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHGA9Q9Y5G4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGA9Q9Y5G4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGA9Q9Y5G4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGA9Q9Y5G4 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHGA9Q9Y5G4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHGA9Q9Y5G4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
PCDHGA9Q9Y5G4 AL139246.5-201ENST00000606645 996 ntBASIC21.99■■□□□ 1.11
PCDHGA9Q9Y5G4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGA9Q9Y5G4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
PCDHGA9Q9Y5G4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGA9Q9Y5G4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHGA9Q9Y5G4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGA9Q9Y5G4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGA9Q9Y5G4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGA9Q9Y5G4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHGA9Q9Y5G4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.98■■□□□ 1.11
PCDHGA9Q9Y5G4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHGA9Q9Y5G4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.97■■□□□ 1.11
PCDHGA9Q9Y5G4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PCDHGA9Q9Y5G4 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHGA9Q9Y5G4 AC131281.2-201ENST00000520478 145 ntBASIC21.97■■□□□ 1.11
PCDHGA9Q9Y5G4 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.97■■□□□ 1.11
PCDHGA9Q9Y5G4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.97■■□□□ 1.11
PCDHGA9Q9Y5G4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA9Q9Y5G4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA9Q9Y5G4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.96■■□□□ 1.11
PCDHGA9Q9Y5G4 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.96■■□□□ 1.11
PCDHGA9Q9Y5G4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.96■■□□□ 1.11
PCDHGA9Q9Y5G4 AC011551.1-201ENST00000614101 683 ntBASIC21.96■■□□□ 1.11
PCDHGA9Q9Y5G4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA9Q9Y5G4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PCDHGA9Q9Y5G4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms