Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HPF1Q9NWY4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HPF1Q9NWY4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HPF1Q9NWY4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
HPF1Q9NWY4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.79■■□□□ 1.08
HPF1Q9NWY4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.79■■□□□ 1.08
HPF1Q9NWY4 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.79■■□□□ 1.08
HPF1Q9NWY4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.79■■□□□ 1.08
HPF1Q9NWY4 AC097639.1-201ENST00000565519 1891 ntBASIC21.79■■□□□ 1.08
HPF1Q9NWY4 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HPF1Q9NWY4 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HPF1Q9NWY4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HPF1Q9NWY4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
HPF1Q9NWY4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HPF1Q9NWY4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.78■■□□□ 1.08
HPF1Q9NWY4 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HPF1Q9NWY4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HPF1Q9NWY4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
HPF1Q9NWY4 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HPF1Q9NWY4 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HPF1Q9NWY4 KRT18P24-201ENST00000344739 1156 ntBASIC21.77■■□□□ 1.08
HPF1Q9NWY4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
HPF1Q9NWY4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HPF1Q9NWY4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HPF1Q9NWY4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HPF1Q9NWY4 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.77■■□□□ 1.08
HPF1Q9NWY4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
HPF1Q9NWY4 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.76■■□□□ 1.07
HPF1Q9NWY4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.76■■□□□ 1.07
HPF1Q9NWY4 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
HPF1Q9NWY4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.76■■□□□ 1.07
HPF1Q9NWY4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.76■■□□□ 1.07
HPF1Q9NWY4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.76■■□□□ 1.07
HPF1Q9NWY4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HPF1Q9NWY4 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.75■■□□□ 1.07
HPF1Q9NWY4 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HPF1Q9NWY4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HPF1Q9NWY4 AC120024.1-201ENST00000562672 995 ntBASIC21.75■■□□□ 1.07
HPF1Q9NWY4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
HPF1Q9NWY4 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.75■■□□□ 1.07
HPF1Q9NWY4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HPF1Q9NWY4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HPF1Q9NWY4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.74■■□□□ 1.07
HPF1Q9NWY4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HPF1Q9NWY4 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
HPF1Q9NWY4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
HPF1Q9NWY4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.74■■□□□ 1.07
HPF1Q9NWY4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
HPF1Q9NWY4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.74■■□□□ 1.07
HPF1Q9NWY4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.74■■□□□ 1.07
HPF1Q9NWY4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
HPF1Q9NWY4 FOXO3B-201ENST00000395675 1928 ntBASIC21.74■■□□□ 1.07
HPF1Q9NWY4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HPF1Q9NWY4 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HPF1Q9NWY4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
HPF1Q9NWY4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HPF1Q9NWY4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HPF1Q9NWY4 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HPF1Q9NWY4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
HPF1Q9NWY4 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HPF1Q9NWY4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.73■■□□□ 1.07
HPF1Q9NWY4 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
HPF1Q9NWY4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HPF1Q9NWY4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HPF1Q9NWY4 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HPF1Q9NWY4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HPF1Q9NWY4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.72■■□□□ 1.07
HPF1Q9NWY4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HPF1Q9NWY4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HPF1Q9NWY4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
HPF1Q9NWY4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
HPF1Q9NWY4 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.71■■□□□ 1.07
HPF1Q9NWY4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HPF1Q9NWY4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.71■■□□□ 1.07
HPF1Q9NWY4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.71■■□□□ 1.07
HPF1Q9NWY4 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HPF1Q9NWY4 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.71■■□□□ 1.07
HPF1Q9NWY4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.71■■□□□ 1.07
HPF1Q9NWY4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HPF1Q9NWY4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
HPF1Q9NWY4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.7■■□□□ 1.07
HPF1Q9NWY4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
HPF1Q9NWY4 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HPF1Q9NWY4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HPF1Q9NWY4 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.7■■□□□ 1.06
HPF1Q9NWY4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HPF1Q9NWY4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.7■■□□□ 1.06
HPF1Q9NWY4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.7■■□□□ 1.06
HPF1Q9NWY4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HPF1Q9NWY4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
HPF1Q9NWY4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HPF1Q9NWY4 BX664725.1-201ENST00000438252 379 ntBASIC21.69■■□□□ 1.06
HPF1Q9NWY4 AC239859.2-201ENST00000444165 318 ntBASIC21.69■■□□□ 1.06
HPF1Q9NWY4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
HPF1Q9NWY4 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HPF1Q9NWY4 Z92544.1-202ENST00000571933 1220 ntBASIC21.69■■□□□ 1.06
HPF1Q9NWY4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HPF1Q9NWY4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HPF1Q9NWY4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HPF1Q9NWY4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms