Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH18Q9HCL0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PCDH18Q9HCL0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.46■■□□□ 1.51
PCDH18Q9HCL0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.46■■□□□ 1.51
PCDH18Q9HCL0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
PCDH18Q9HCL0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.46■■□□□ 1.51
PCDH18Q9HCL0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDH18Q9HCL0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.46■■□□□ 1.51
PCDH18Q9HCL0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDH18Q9HCL0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PCDH18Q9HCL0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PCDH18Q9HCL0 AP003733.4-201ENST00000623785 1697 ntBASIC24.46■■□□□ 1.51
PCDH18Q9HCL0 FOXO3B-201ENST00000395675 1928 ntBASIC24.45■■□□□ 1.51
PCDH18Q9HCL0 AL139125.2-201ENST00000623134 1869 ntBASIC24.45■■□□□ 1.51
PCDH18Q9HCL0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.45■■□□□ 1.5
PCDH18Q9HCL0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PCDH18Q9HCL0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.45■■□□□ 1.5
PCDH18Q9HCL0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PCDH18Q9HCL0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDH18Q9HCL0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDH18Q9HCL0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.44■■□□□ 1.5
PCDH18Q9HCL0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PCDH18Q9HCL0 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
PCDH18Q9HCL0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDH18Q9HCL0 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDH18Q9HCL0 AC087393.1-201ENST00000582896 145 ntBASIC24.43■■□□□ 1.5
PCDH18Q9HCL0 MIR6089-201ENST00000616698 64 ntBASIC24.43■■□□□ 1.5
PCDH18Q9HCL0 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
PCDH18Q9HCL0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PCDH18Q9HCL0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PCDH18Q9HCL0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDH18Q9HCL0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDH18Q9HCL0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.42■■□□□ 1.5
PCDH18Q9HCL0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDH18Q9HCL0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PCDH18Q9HCL0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDH18Q9HCL0 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.41■■□□□ 1.5
PCDH18Q9HCL0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDH18Q9HCL0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDH18Q9HCL0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PCDH18Q9HCL0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDH18Q9HCL0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDH18Q9HCL0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PCDH18Q9HCL0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
PCDH18Q9HCL0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.41■■□□□ 1.5
PCDH18Q9HCL0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PCDH18Q9HCL0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDH18Q9HCL0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC24.4■■□□□ 1.5
PCDH18Q9HCL0 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PCDH18Q9HCL0 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
PCDH18Q9HCL0 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDH18Q9HCL0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDH18Q9HCL0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PCDH18Q9HCL0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PCDH18Q9HCL0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.4■■□□□ 1.5
PCDH18Q9HCL0 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PCDH18Q9HCL0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PCDH18Q9HCL0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PCDH18Q9HCL0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC24.39■■□□□ 1.49
PCDH18Q9HCL0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.38■■□□□ 1.49
PCDH18Q9HCL0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.38■■□□□ 1.49
PCDH18Q9HCL0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.38■■□□□ 1.49
PCDH18Q9HCL0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.38■■□□□ 1.49
PCDH18Q9HCL0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.38■■□□□ 1.49
PCDH18Q9HCL0 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDH18Q9HCL0 PREB-202ENST00000406567 1910 ntTSL 5 BASIC24.37■■□□□ 1.49
PCDH18Q9HCL0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PCDH18Q9HCL0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDH18Q9HCL0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDH18Q9HCL0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.37■■□□□ 1.49
PCDH18Q9HCL0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PCDH18Q9HCL0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDH18Q9HCL0 AC093323.1-202ENST00000635031 2045 ntBASIC24.37■■□□□ 1.49
PCDH18Q9HCL0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDH18Q9HCL0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
PCDH18Q9HCL0 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.36■■□□□ 1.49
PCDH18Q9HCL0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDH18Q9HCL0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDH18Q9HCL0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC24.36■■□□□ 1.49
PCDH18Q9HCL0 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
PCDH18Q9HCL0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDH18Q9HCL0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.36■■□□□ 1.49
PCDH18Q9HCL0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH18Q9HCL0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.35■■□□□ 1.49
PCDH18Q9HCL0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.35■■□□□ 1.49
PCDH18Q9HCL0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.35■■□□□ 1.49
PCDH18Q9HCL0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH18Q9HCL0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH18Q9HCL0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH18Q9HCL0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH18Q9HCL0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.35■■□□□ 1.49
PCDH18Q9HCL0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH18Q9HCL0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.35■■□□□ 1.49
PCDH18Q9HCL0 DUX4L18-201ENST00000553347 1267 ntBASIC24.35■■□□□ 1.49
PCDH18Q9HCL0 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC24.35■■□□□ 1.49
PCDH18Q9HCL0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDH18Q9HCL0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDH18Q9HCL0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
PCDH18Q9HCL0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDH18Q9HCL0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms