Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
PCDH15Q96QU1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.37■■□□□ 1.33
PCDH15Q96QU1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.37■■□□□ 1.33
PCDH15Q96QU1 AC133561.4-201ENST00000566112 224 ntBASIC23.37■■□□□ 1.33
PCDH15Q96QU1 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH15Q96QU1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
PCDH15Q96QU1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.36■■□□□ 1.33
PCDH15Q96QU1 AC005837.3-201ENST00000612163 286 ntBASIC23.36■■□□□ 1.33
PCDH15Q96QU1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH15Q96QU1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH15Q96QU1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH15Q96QU1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH15Q96QU1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH15Q96QU1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH15Q96QU1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDH15Q96QU1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH15Q96QU1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.35■■□□□ 1.33
PCDH15Q96QU1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.35■■□□□ 1.33
PCDH15Q96QU1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.35■■□□□ 1.33
PCDH15Q96QU1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDH15Q96QU1 AF131216.4-201ENST00000638924 1588 ntBASIC23.34■■□□□ 1.33
PCDH15Q96QU1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDH15Q96QU1 GAK-223ENST00000628912 497 ntTSL 5 BASIC23.34■■□□□ 1.33
PCDH15Q96QU1 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDH15Q96QU1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDH15Q96QU1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.34■■□□□ 1.33
PCDH15Q96QU1 ZNRF2P3-201ENST00000424200 374 ntBASIC23.34■■□□□ 1.33
PCDH15Q96QU1 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.34■■□□□ 1.33
PCDH15Q96QU1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDH15Q96QU1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH15Q96QU1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDH15Q96QU1 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.33■■□□□ 1.33
PCDH15Q96QU1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
PCDH15Q96QU1 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.33■■□□□ 1.32
PCDH15Q96QU1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
PCDH15Q96QU1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.32■■□□□ 1.32
PCDH15Q96QU1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
PCDH15Q96QU1 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.32■■□□□ 1.32
PCDH15Q96QU1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH15Q96QU1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH15Q96QU1 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDH15Q96QU1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDH15Q96QU1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
PCDH15Q96QU1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
PCDH15Q96QU1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
PCDH15Q96QU1 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
PCDH15Q96QU1 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDH15Q96QU1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.3■■□□□ 1.32
PCDH15Q96QU1 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH15Q96QU1 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
PCDH15Q96QU1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDH15Q96QU1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH15Q96QU1 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH15Q96QU1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.29■■□□□ 1.32
PCDH15Q96QU1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH15Q96QU1 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH15Q96QU1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDH15Q96QU1 SUDS3P1-201ENST00000505831 966 ntBASIC23.29■■□□□ 1.32
PCDH15Q96QU1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.29■■□□□ 1.32
PCDH15Q96QU1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH15Q96QU1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH15Q96QU1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH15Q96QU1 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.28■■□□□ 1.32
PCDH15Q96QU1 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDH15Q96QU1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.28■■□□□ 1.32
PCDH15Q96QU1 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDH15Q96QU1 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDH15Q96QU1 AC106739.1-201ENST00000617035 715 ntBASIC23.28■■□□□ 1.32
PCDH15Q96QU1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH15Q96QU1 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH15Q96QU1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.27■■□□□ 1.32
PCDH15Q96QU1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH15Q96QU1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDH15Q96QU1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDH15Q96QU1 AC026271.2-201ENST00000428091 497 ntBASIC23.27■■□□□ 1.32
PCDH15Q96QU1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.27■■□□□ 1.32
PCDH15Q96QU1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
PCDH15Q96QU1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.26■■□□□ 1.31
PCDH15Q96QU1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
PCDH15Q96QU1 SNX5-217ENST00000606557 1087 ntBASIC23.26■■□□□ 1.31
PCDH15Q96QU1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH15Q96QU1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH15Q96QU1 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDH15Q96QU1 AC142086.6-201ENST00000621154 1765 ntBASIC23.26■■□□□ 1.31
PCDH15Q96QU1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH15Q96QU1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.25■■□□□ 1.31
PCDH15Q96QU1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.25■■□□□ 1.31
PCDH15Q96QU1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDH15Q96QU1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
PCDH15Q96QU1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDH15Q96QU1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.25■■□□□ 1.31
PCDH15Q96QU1 AL031432.3-201ENST00000607698 485 ntBASIC23.25■■□□□ 1.31
PCDH15Q96QU1 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH15Q96QU1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.24■■□□□ 1.31
PCDH15Q96QU1 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH15Q96QU1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH15Q96QU1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.24■■□□□ 1.31
PCDH15Q96QU1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.24■■□□□ 1.31
PCDH15Q96QU1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDH15Q96QU1 AP004609.3-201ENST00000610705 1884 ntBASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms