Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
FOXN4Q96NZ1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
FOXN4Q96NZ1 AL139125.2-201ENST00000623134 1869 ntBASIC21.05■□□□□ 0.96
FOXN4Q96NZ1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXN4Q96NZ1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
FOXN4Q96NZ1 KRT18P60-201ENST00000312876 1297 ntBASIC21.04■□□□□ 0.96
FOXN4Q96NZ1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
FOXN4Q96NZ1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
FOXN4Q96NZ1 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXN4Q96NZ1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
FOXN4Q96NZ1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXN4Q96NZ1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXN4Q96NZ1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
FOXN4Q96NZ1 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
FOXN4Q96NZ1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FOXN4Q96NZ1 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
FOXN4Q96NZ1 AC009831.1-201ENST00000580420 1582 ntBASIC21.03■□□□□ 0.96
FOXN4Q96NZ1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
FOXN4Q96NZ1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXN4Q96NZ1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
FOXN4Q96NZ1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXN4Q96NZ1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
FOXN4Q96NZ1 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.02■□□□□ 0.96
FOXN4Q96NZ1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.02■□□□□ 0.96
FOXN4Q96NZ1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FOXN4Q96NZ1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
FOXN4Q96NZ1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
FOXN4Q96NZ1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FOXN4Q96NZ1 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FOXN4Q96NZ1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
FOXN4Q96NZ1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
FOXN4Q96NZ1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
FOXN4Q96NZ1 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.01■□□□□ 0.95
FOXN4Q96NZ1 AC133552.2-201ENST00000619106 1032 ntBASIC21.01■□□□□ 0.95
FOXN4Q96NZ1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXN4Q96NZ1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXN4Q96NZ1 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
FOXN4Q96NZ1 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXN4Q96NZ1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21■□□□□ 0.95
FOXN4Q96NZ1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
FOXN4Q96NZ1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
FOXN4Q96NZ1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
FOXN4Q96NZ1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
FOXN4Q96NZ1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21■□□□□ 0.95
FOXN4Q96NZ1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
FOXN4Q96NZ1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXN4Q96NZ1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXN4Q96NZ1 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXN4Q96NZ1 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.99■□□□□ 0.95
FOXN4Q96NZ1 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
FOXN4Q96NZ1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
FOXN4Q96NZ1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
FOXN4Q96NZ1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXN4Q96NZ1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
FOXN4Q96NZ1 TSPY13P-201ENST00000338964 914 ntBASIC20.98■□□□□ 0.95
FOXN4Q96NZ1 AC004987.1-201ENST00000428627 508 ntBASIC20.98■□□□□ 0.95
FOXN4Q96NZ1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.98■□□□□ 0.95
FOXN4Q96NZ1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.98■□□□□ 0.95
FOXN4Q96NZ1 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
FOXN4Q96NZ1 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
FOXN4Q96NZ1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FOXN4Q96NZ1 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
FOXN4Q96NZ1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FOXN4Q96NZ1 ATP5G2P3-201ENST00000429083 425 ntBASIC20.97■□□□□ 0.95
FOXN4Q96NZ1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
FOXN4Q96NZ1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FOXN4Q96NZ1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
FOXN4Q96NZ1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.96■□□□□ 0.95
FOXN4Q96NZ1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FOXN4Q96NZ1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.96■□□□□ 0.95
FOXN4Q96NZ1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
FOXN4Q96NZ1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.96■□□□□ 0.95
FOXN4Q96NZ1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.96■□□□□ 0.95
FOXN4Q96NZ1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.96■□□□□ 0.95
FOXN4Q96NZ1 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FOXN4Q96NZ1 LINC01124-201ENST00000409786 2117 ntBASIC20.95■□□□□ 0.94
FOXN4Q96NZ1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FOXN4Q96NZ1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
FOXN4Q96NZ1 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.95■□□□□ 0.94
FOXN4Q96NZ1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FOXN4Q96NZ1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FOXN4Q96NZ1 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
FOXN4Q96NZ1 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.94■□□□□ 0.94
FOXN4Q96NZ1 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FOXN4Q96NZ1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
FOXN4Q96NZ1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FOXN4Q96NZ1 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
FOXN4Q96NZ1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.94■□□□□ 0.94
FOXN4Q96NZ1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FOXN4Q96NZ1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
FOXN4Q96NZ1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.93■□□□□ 0.94
FOXN4Q96NZ1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXN4Q96NZ1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXN4Q96NZ1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXN4Q96NZ1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FOXN4Q96NZ1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.93■□□□□ 0.94
FOXN4Q96NZ1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FOXN4Q96NZ1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
FOXN4Q96NZ1 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXN4Q96NZ1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms