Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HPS1Q92902 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HPS1Q92902 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HPS1Q92902 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HPS1Q92902 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HPS1Q92902 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HPS1Q92902 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HPS1Q92902 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HPS1Q92902 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
HPS1Q92902 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
HPS1Q92902 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
HPS1Q92902 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HPS1Q92902 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
HPS1Q92902 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HPS1Q92902 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.23■□□□□ 0.99
HPS1Q92902 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HPS1Q92902 AC018358.1-201ENST00000631079 1402 ntBASIC21.22■□□□□ 0.99
HPS1Q92902 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HPS1Q92902 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
HPS1Q92902 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.22■□□□□ 0.99
HPS1Q92902 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HPS1Q92902 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
HPS1Q92902 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HPS1Q92902 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
HPS1Q92902 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HPS1Q92902 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HPS1Q92902 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.2■□□□□ 0.99
HPS1Q92902 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.99
HPS1Q92902 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
HPS1Q92902 AC138932.3-201ENST00000567634 1902 ntBASIC21.2■□□□□ 0.98
HPS1Q92902 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HPS1Q92902 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
HPS1Q92902 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.2■□□□□ 0.98
HPS1Q92902 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HPS1Q92902 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.2■□□□□ 0.98
HPS1Q92902 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
HPS1Q92902 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.19■□□□□ 0.98
HPS1Q92902 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.19■□□□□ 0.98
HPS1Q92902 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
HPS1Q92902 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
HPS1Q92902 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
HPS1Q92902 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.19■□□□□ 0.98
HPS1Q92902 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HPS1Q92902 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HPS1Q92902 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.18■□□□□ 0.98
HPS1Q92902 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
HPS1Q92902 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.18■□□□□ 0.98
HPS1Q92902 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HPS1Q92902 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
HPS1Q92902 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HPS1Q92902 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
HPS1Q92902 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HPS1Q92902 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HPS1Q92902 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.16■□□□□ 0.98
HPS1Q92902 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HPS1Q92902 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
HPS1Q92902 MIR219A2-201ENST00000608502 1504 ntBASIC21.16■□□□□ 0.98
HPS1Q92902 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.16■□□□□ 0.98
HPS1Q92902 NTF6A-201ENST00000591175 560 ntBASIC21.16■□□□□ 0.98
HPS1Q92902 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.16■□□□□ 0.98
HPS1Q92902 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
HPS1Q92902 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.15■□□□□ 0.98
HPS1Q92902 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.15■□□□□ 0.98
HPS1Q92902 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
HPS1Q92902 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
HPS1Q92902 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HPS1Q92902 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HPS1Q92902 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HPS1Q92902 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
HPS1Q92902 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
HPS1Q92902 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HPS1Q92902 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HPS1Q92902 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HPS1Q92902 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HPS1Q92902 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HPS1Q92902 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HPS1Q92902 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
HPS1Q92902 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HPS1Q92902 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HPS1Q92902 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.13■□□□□ 0.97
HPS1Q92902 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
HPS1Q92902 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HPS1Q92902 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HPS1Q92902 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HPS1Q92902 AC060814.1-201ENST00000554326 538 ntBASIC21.13■□□□□ 0.97
HPS1Q92902 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HPS1Q92902 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HPS1Q92902 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
HPS1Q92902 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.13■□□□□ 0.97
HPS1Q92902 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.13■□□□□ 0.97
HPS1Q92902 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HPS1Q92902 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.13■□□□□ 0.97
HPS1Q92902 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HPS1Q92902 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HPS1Q92902 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HPS1Q92902 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
HPS1Q92902 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.13■□□□□ 0.97
HPS1Q92902 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HPS1Q92902 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HPS1Q92902 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms